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"""loading script for the pubchemqc-pm6 data""" |
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import ijson |
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import datasets |
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_CITATION = """\ |
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@article{Nakata:2020:5891, |
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author = {Maho Nakata and Tomomi Shimazaki and Masatomo Hashimoto and Toshiyuki Maeda}, |
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doi = {10.1021/acs.jcim.0c00740}, |
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issn = {1549960X}, |
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issue = {12}, |
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journal = {Journal of Chemical Information and Modeling}, |
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month = {12}, |
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pages = {5891-5899}, |
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pmid = {33104339}, |
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publisher = {American Chemical Society}, |
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title = {PubChemQC PM6: Data Sets of 221 Million Molecules with Optimized Molecular Geometries and Electronic Properties}, |
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volume = {60}, |
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url = {https://pubs.acs.org/doi/abs/10.1021/acs.jcim.0c00740}, |
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year = {2020}, |
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} |
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""" |
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_DESCRIPTION = """\ |
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The PubChemQC PM6 dataset consists of optimized molecular geometries \ |
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and electronic properties calculated by the PM6 method for 94.0% of the 91.6 million \ |
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molecules cataloged in PubChem Compounds retrieved on August 29, 2016. In addition to \ |
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neutral states, the cationic, anionic, and spin flipped electronic states of respectively \ |
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56.2%, 49.7%, and 41.3% of the molecules have also been studied. As such, the grand total \ |
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of the PM6 calculations amounted to 221 million. |
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""" |
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_HOMEPAGE = "https://nakatamaho.riken.jp/pubchemqc.riken.jp/pm6_datasets.html" |
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_LICENSE = "https://creativecommons.org/licenses/by/4.0" |
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_BASE_DATA_URL_FORMAT_STR = "https://huggingface.co/datasets/molssiai-hub/pubchemqc-pm6/resolve/main/data/{name}/train/{range}.json" |
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_CONFIG_NAMES = [ |
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"pm6opt", |
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"pm6opt_chon300nosalt", |
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"pm6opt_chon500nosalt", |
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"pm6opt_chnops500nosalt" |
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"pm6opt_chnopsfcl300nosalt", |
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"pm6opt_chnopsfcl500nosalt", |
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"pm6opt_chnopsfclnakmgca500" |
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] |
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|
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_FEATURE_KEYS = [ |
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'cid', |
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'state', |
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'pubchem-inchi', |
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'pubchem-charge', |
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'pubchem-version', |
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'name', |
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'coordinates', |
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'atomic-numbers', |
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'atom-count', |
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'heavy-atom-count', |
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'core-electrons', |
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'version', |
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'obabel-inchi', |
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'pm6-obabel-canonical-smiles', |
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'charge', |
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'energy-beta-gap', |
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'energy-beta-homo', |
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'energy-beta-lumo', |
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'energy-alpha-gap', |
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'energy-alpha-homo', |
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'energy-alpha-lumo', |
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'total-energy', |
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'enthalpy', |
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'homos', |
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'orbital-energies', |
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'mo-count', |
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'basis-count', |
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'temperature', |
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'multiplicity', |
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'number-of-atoms', |
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'mulliken-partial-charges', |
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'dipole-moment', |
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'frequencies', |
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'intensities', |
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'pubchem-multiplicity', |
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'pubchem-obabel-canonical-smiles', |
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'pubchem-isomeric-smiles', |
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'pubchem-molecular-weight', |
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'pubchem-molecular-formula' |
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] |
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|
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_FEATURE_TYPES = datasets.Features( |
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{ |
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'cid': datasets.Value(dtype='int64', id=None), |
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'state': datasets.Value(dtype='string', id=None), |
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'pubchem-inchi': datasets.Value(dtype='string', id=None), |
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'pubchem-charge': datasets.Value(dtype='int64', id=None), |
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'pubchem-version': datasets.Value(dtype='string', id=None), |
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'name': datasets.Value(dtype='string', id=None), |
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'coordinates': datasets.Sequence(feature=datasets.Value(dtype='float64', id=None), length=-1, id=None), |
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'atomic-numbers': datasets.Sequence(feature=datasets.Value(dtype='int64', id=None), length=-1, id=None), |
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'atom-count': datasets.Value(dtype='int64', id=None), |
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'heavy-atom-count': datasets.Value(dtype='int64', id=None), |
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'core-electrons': datasets.Sequence(feature=datasets.Value(dtype='int64', id=None), length=-1, id=None), |
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'version': datasets.Value(dtype='string', id=None), |
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'obabel-inchi': datasets.Value(dtype='string', id=None), |
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'pm6-obabel-canonical-smiles': datasets.Value(dtype='string', id=None), |
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'charge': datasets.Value(dtype='int64', id=None), |
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'energy-beta-gap': datasets.Value(dtype='float64', id=None), |
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'energy-beta-homo': datasets.Value(dtype='float64', id=None), |
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'energy-beta-lumo': datasets.Value(dtype='float64', id=None), |
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'energy-alpha-gap': datasets.Value(dtype='float64', id=None), |
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'energy-alpha-homo': datasets.Value(dtype='float64', id=None), |
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'energy-alpha-lumo': datasets.Value(dtype='float64', id=None), |
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'total-energy': datasets.Value(dtype='float64', id=None), |
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'enthalpy': datasets.Value(dtype='float64', id=None), |
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'homos': datasets.Sequence(feature=datasets.Value(dtype='int64', id=None), length=-1, id=None), |
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'orbital-energies': datasets.Sequence(feature=datasets.Sequence(feature=datasets.Value(dtype='float64', id=None), length=-1, id=None), length=-1, id=None), |
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'mo-count': datasets.Value(dtype='int64', id=None), |
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'basis-count': datasets.Value(dtype='int64', id=None), |
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'temperature': datasets.Value(dtype='float64', id=None), |
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'multiplicity': datasets.Value(dtype='int64', id=None), |
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'number-of-atoms': datasets.Value(dtype='int64', id=None), |
|
'mulliken-partial-charges': datasets.Sequence(feature=datasets.Value(dtype='float64', id=None), length=-1, id=None), |
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'dipole-moment': datasets.Value(dtype='float64', id=None), |
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'frequencies': datasets.Sequence(feature=datasets.Value(dtype='float64', id=None), length=-1, id=None), |
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'intensities': datasets.Sequence(feature=datasets.Value(dtype='float64', id=None), length=-1, id=None), |
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'pubchem-multiplicity': datasets.Value(dtype='int64', id=None), |
|
'pubchem-obabel-canonical-smiles': datasets.Value(dtype='string', id=None), |
|
'pubchem-isomeric-smiles': datasets.Value(dtype='string', id=None), |
|
'pubchem-molecular-weight': datasets.Value(dtype='float64', id=None), |
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'pubchem-molecular-formula': datasets.Value(dtype='string', id=None) |
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} |
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) |
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|
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_ID_RANGES_PM6OPT = [ |
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"066015983-066097499", |
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"087000776-087089527", |
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"058677778-058765750", |
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"110162376-110239526", |
|
"028335040-028468283", |
|
"092243704-092322956", |
|
"065860342-065940848", |
|
"058940206-059028518", |
|
"083580669-083651806", |
|
"002863460-002944485", |
|
"019303895-019404899", |
|
"110472971-110547341", |
|
"093654011-093728754", |
|
"063053850-063129974", |
|
"009057356-009150515", |
|
"119450152-119540216", |
|
"115923626-116001333", |
|
"066820335-066901840", |
|
"107230203-107308139", |
|
"025163647-025254021", |
|
"054951146-055029921", |
|
"018914660-019029351", |
|
"051326288-051439489", |
|
"040446496-040597112", |
|
"043611506-043687973", |
|
"068165803-068243974", |
|
"009630576-009755333", |
|
"108566095-108637767", |
|
"067562913-067648683", |
|
"005662914-005773947", |
|
"117704585-117791505", |
|
"107783345-107859775", |
|
"056383674-056463371", |
|
"110610483-110686156", |
|
"118456152-118542296", |
|
"079169537-079246597", |
|
"059468972-059556151", |
|
"096462695-096541074", |
|
"103873819-103951864", |
|
"061048585-061128439", |
|
"052496981-052594278", |
|
"003035994-003129705", |
|
"069398027-069481121", |
|
"094038248-094115359", |
|
"112552950-112629205", |
|
"056063012-056144045", |
|
"116330579-116409861", |
|
"108637768-108709511", |
|
"106764676-106840887", |
|
"082159509-082236637", |
|
"117097881-117170243", |
|
"097905831-097987765", |
|
"071334081-071415976", |
|
"108108664-108186188", |
|
"002778591-002863459", |
|
"042742767-042821083", |
|
"100571670-100662063", |
|
"061205573-061281063", |
|
"116081527-116165680", |
|
"105111750-105193248", |
|
"077030676-077419252", |
|
"113501324-113579573", |
|
"024282066-024380305", |
|
"106292691-106373872", |
|
"026275129-026476509", |
|
"115445242-115521464", |
|
"092082521-092162916", |
|
"041564061-041960811", |
|
"071840253-071918309", |
|
"059906656-060001356", |
|
"115291115-115366819", |
|
"011070192-011156086", |
|
"056881960-056962300", |
|
"093418543-093497510", |
|
"016095098-016248698", |
|
"098942473-099021031", |
|
"009755333-009874014", |
|
"058156884-058243237", |
|
"058500038-058586074", |
|
"078862267-078938945", |
|
"096315481-096387594", |
|
"081481442-081562021", |
|
"070846446-070926197", |
|
"117465558-117542766", |
|
"083941800-084015009", |
|
"084015009-084088357", |
|
"005287890-005374110", |
|
"071415977-071501913", |
|
"080563506-080643422", |
|
"083651806-083724315", |
|
"118542297-118624626", |
|
"050506208-050617537", |
|
"108788737-108859590", |
|
"089587115-089669128", |
|
"096387595-096462694", |
|
"105654558-105729165", |
|
"113816770-113895063", |
|
"053802949-053907680", |
|
"112315312-112394805", |
|
"041097107-041265411", |
|
"057469359-057556555", |
|
"055582023-055662290", |
|
"086662480-086746558", |
|
"080722059-080795256", |
|
"045517727-045615284", |
|
"043840812-043932688", |
|
"082456990-082528214", |
|
"063129974-063203757", |
|
"042388034-042563000", |
|
"086918676-087000776", |
|
"108491327-108566095", |
|
"096759084-096834427", |
|
"022010173-022119709", |
|
"098314776-098407999", |
|
"042821083-042896802", |
|
"058243238-058329785", |
|
"105504519-105581215", |
|
"080331177-080405307", |
|
"050079847-050161916", |
|
"104571616-104647675", |
|
"031569351-032148590", |
|
"093880995-093960333", |
|
"095797243-095873759", |
|
"045088323-045185345", |
|
"072070630-072147336", |
|
"017405938-017488429", |
|
"053169985-053249089", |
|
"075363179-075441732", |
|
"045706645-045795536", |
|
"007153661-007252410", |
|
"120962075-121046734", |
|
"095190205-095265770", |
|
"110761171-110836144", |
|
"052089989-052187934", |
|
"008658138-008761733", |
|
"101039928-101134116", |
|
"104415419-104492785", |
|
"094344520-094420402", |
|
"116409861-116490425", |
|
"047092309-047472487", |
|
"064686967-064762309", |
|
"105968306-106053088", |
|
"011580729-011665553", |
|
"109841428-109925982", |
|
"001065437-001153278", |
|
"004378517-004469559", |
|
"050808907-050886215", |
|
"080863729-080939123", |
|
"079324945-079401185", |
|
"025372233-025520420", |
|
"094729853-094802183", |
|
"012549878-012827652", |
|
"108342164-108419919", |
|
"023110547-023253749", |
|
"020741611-020841289", |
|
"101428162-101519819", |
|
"027823200-028162720", |
|
"119717691-119804932", |
|
"082672792-082749196", |
|
"004103812-004196635", |
|
"087563727-087658817", |
|
"102451948-102541869", |
|
"059383446-059468972", |
|
"044214649-044313228", |
|
"018221966-018303234", |
|
"000551686-000635379", |
|
"065072588-065153994", |
|
"071676359-071758580", |
|
"079401186-079481250", |
|
"111283310-111379148", |
|
"055741846-055820820", |
|
"114448366-114523059", |
|
"043457009-043535162", |
|
"050980849-051084840", |
|
"027437271-027823200", |
|
"087280093-087372083", |
|
"061281063-061357969", |
|
"116717146-116792426", |
|
"101709724-101804219", |
|
"052003451-052089988", |
|
"092566175-092639749", |
|
"093728755-093801765", |
|
"017193134-017301780", |
|
"049718984-049802589", |
|
"096688146-096759084", |
|
"092883234-092961218", |
|
"087658817-087753276", |
|
"060893577-060970246", |
|
"118288038-118370781", |
|
"107387165-107464221", |
|
"096987003-097064118", |
|
"010984320-011070192", |
|
"024465665-024552847", |
|
"062901010-062976324", |
|
"112035720-112131519", |
|
"120602198-120693760", |
|
"013643782-013960827", |
|
"053012153-053090427", |
|
"037343263-038115421", |
|
"049339657-049718984", |
|
"070251064-070335743", |
|
"045955331-046034360", |
|
"095418637-095490611", |
|
"112792075-112870582", |
|
"033618401-034467073", |
|
"040796593-040956126", |
|
"054800849-054873342", |
|
"102857979-102935675", |
|
"097600184-097676925", |
|
"056802439-056881960", |
|
"096024199-096098110", |
|
"081936638-082011653", |
|
"019404899-019491428", |
|
"091035437-091121992", |
|
"012077441-012299222", |
|
"073929069-074237481", |
|
"118370781-118456152", |
|
"063279573-063356507", |
|
"051084841-051163352", |
|
"118624626-118709353", |
|
"089252399-089335401", |
|
"002944486-003035993", |
|
"086169344-086567136", |
|
"101519819-101614334", |
|
"120343225-120432089", |
|
"121046734-121126948", |
|
"018059601-018138704", |
|
"087089527-087186465", |
|
"043932689-044027562", |
|
"113108840-113188315", |
|
"111465506-111556575", |
|
"113895063-113972992", |
|
"044599534-044895982", |
|
"095721400-095797243", |
|
"105887090-105968305", |
|
"080939124-081010459", |
|
"118042386-118123816", |
|
"096241906-096315480", |
|
"109372295-109464719", |
|
"049802589-049897570", |
|
"021794389-021899158", |
|
"096912020-096987003", |
|
"081788212-081863532", |
|
"100029691-100113786", |
|
"068000959-068080268", |
|
"076327914-076911356", |
|
"104028996-104109233", |
|
"089085396-089168447", |
|
"015292144-015517024", |
|
"023885986-023987991", |
|
"101804220-101896841", |
|
"088915745-089001589", |
|
"079791165-079869946", |
|
"001153279-001246137", |
|
"120172320-120255256", |
|
"067314974-067397880", |
|
"008092788-008187615", |
|
"010473486-010559389", |
|
"090860610-090948640", |
|
"016993670-017084414", |
|
"018138705-018221965", |
|
"042563001-042665228", |
|
"119628683-119717691", |
|
"050416366-050506208", |
|
"100945623-101039927", |
|
"080405307-080484034", |
|
"019135771-019212507", |
|
"112629206-112710662", |
|
"042896803-042977892", |
|
"087372084-087467678", |
|
"022745070-022874877", |
|
"108709512-108788736", |
|
"092406871-092485453", |
|
"006508642-006660452", |
|
"061902671-061980282", |
|
"015020012-015292144", |
|
"109299865-109372295", |
|
"090087551-090171079", |
|
"103795238-103873818", |
|
"071088371-071168078", |
|
"065310553-065389274", |
|
"052594279-052690853", |
|
"110085551-110162375", |
|
"104180973-104260365", |
|
"066984536-067067411", |
|
"006767629-006866648", |
|
"008761733-008864912", |
|
"069817982-069903237", |
|
"090340083-090424258", |
|
"007357995-007471299", |
|
"070074423-070162222", |
|
"016003809-016095098", |
|
"117392036-117465557", |
|
"115064842-115139185", |
|
"046583911-046695689", |
|
"094192502-094270497", |
|
"092639749-092721884", |
|
"070692440-070769087", |
|
"003921023-004011094", |
|
"058329785-058414966", |
|
"096617166-096688145", |
|
"008463017-008559937", |
|
"096541074-096617165", |
|
"059028519-059123224", |
|
"013095510-013347154", |
|
"057987418-058072465", |
|
"064992526-065072588", |
|
"031010550-031569350", |
|
"000797016-000881123", |
|
"061980282-062056641", |
|
"068982846-069063676", |
|
"066736733-066820334", |
|
"091381484-091468356", |
|
"109744115-109841428", |
|
"062820566-062901010", |
|
"105032731-105111750", |
|
"090004391-090087551", |
|
"028815661-029007042", |
|
"086830034-086918676", |
|
"009874014-009959674", |
|
"045615284-045706644", |
|
"021101726-021212881", |
|
"102704748-102780926", |
|
"110836145-110911381", |
|
"113421804-113501324", |
|
"013960827-014348742", |
|
"019767190-019881044", |
|
"069987062-070074420", |
|
"095265770-095343955", |
|
"116566813-116641055", |
|
"020641653-020741610", |
|
"120693761-120783837", |
|
"003129706-003212939", |
|
"051804877-051892003", |
|
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"004218886-004542390", |
|
"079264093-079498949", |
|
"000298192-000618347", |
|
"056692570-056919850", |
|
"099103941-099333222", |
|
"002459086-002750683", |
|
"051599175-051913068", |
|
"028318764-028766923", |
|
"044292533-044909316", |
|
"084525090-084757187", |
|
"066786142-067119443", |
|
"095114348-095322243", |
|
"120844197-121080503", |
|
"060322624-060540596", |
|
"027514494-028318763", |
|
"059675985-060042370", |
|
"026645133-027514492", |
|
"110604556-110810365", |
|
"067119444-067443371", |
|
"069056287-069377478", |
|
"021573921-021980476", |
|
"109290091-109601060", |
|
"050779851-051064899", |
|
"108607951-108866775", |
|
"052729526-053036840", |
|
"052188113-052466942", |
|
"013490470-014622182", |
|
"043228658-043456099", |
|
"005463110-005956813", |
|
"063463294-063705546", |
|
"006446616-006912168", |
|
"041757291-042429278", |
|
"112200151-112463911", |
|
"097208508-097421575", |
|
"000618348-000858464", |
|
"009023155-009281517", |
|
"068414460-068736100", |
|
"114351121-114594093", |
|
"063925551-064146771", |
|
"089761379-090106839", |
|
"119709725-119932593", |
|
"082992507-083220779", |
|
"064379458-064599710", |
|
"092924467-093155910", |
|
"107768730-108087015", |
|
"071258681-071577885", |
|
"091383793-091692062", |
|
"010263340-010590462", |
|
"103922104-104150891", |
|
"009281519-009541874", |
|
"053564053-053877584", |
|
"043964417-044292530", |
|
"055758721-055984341", |
|
"022715303-023142703", |
|
"005956815-006446615", |
|
"121080504-121338418", |
|
"102890635-103119776", |
|
"065975552-066217380", |
|
"110394420-110604555", |
|
"010915402-011256444", |
|
"011593760-011927480", |
|
"080683248-080903159", |
|
"008765939-009023151", |
|
"101156840-101560752", |
|
"060775110-061002140", |
|
"068736101-069056286", |
|
"062123188-062342012", |
|
"115551568-115783099", |
|
"072837713-073919012", |
|
"064599711-064818263", |
|
"102316362-102641049", |
|
"096374132-096582664", |
|
"044909320-045354865", |
|
"090460110-090704675", |
|
"081639112-081872594", |
|
"054236738-054594086", |
|
"058956680-059325141", |
|
"098219180-098630533", |
|
"001406672-001737952", |
|
"070366892-070671542", |
|
"117187178-117403054", |
|
"017374068-017597263", |
|
"103348550-103590208", |
|
"001127154-001406671", |
|
"094466000-094679458", |
|
"116721684-116956007", |
|
"079737611-079969460", |
|
"082510707-082730510", |
|
"091959634-092249523", |
|
"091053274-091383787", |
|
"105370850-105605696", |
|
"031432263-033082648", |
|
"097421583-097637261", |
|
"080903160-081126250", |
|
"061232897-061458747", |
|
"119026879-119264142", |
|
"110810366-111111070", |
|
"039134454-039969565", |
|
"097637262-097863454", |
|
"058237797-058584083", |
|
"020892923-021197930", |
|
"016749020-017032054", |
|
"003608817-003896329", |
|
"061458748-061681960", |
|
"116495192-116721683", |
|
"079969461-080205407", |
|
"037195989-039134452", |
|
"047096535-049711824", |
|
"071577886-071857205", |
|
"116956008-117187177", |
|
"115783100-116026043", |
|
"116026044-116255201", |
|
"108379631-108607950", |
|
"107237951-107474531", |
|
"103119777-103348549", |
|
"106521269-106751562", |
|
"075447600-076945828", |
|
"007280011-007562988", |
|
"004843212-005134964", |
|
"083646795-083868534", |
|
"005134965-005463109", |
|
"113589081-113835770", |
|
"095750870-095959827", |
|
"087957459-088344699", |
|
"018130068-018433700", |
|
"105605697-105826668", |
|
"008027595-008271155", |
|
"001737953-002135337", |
|
"106286233-106521268", |
|
"059325143-059675984", |
|
"080428165-080683247", |
|
"002750684-003003995", |
|
"121338419-121494125", |
|
"099555502-099859737" |
|
] |
|
|
|
|
|
class PubChemQCPM6Config(datasets.BuilderConfig): |
|
""" |
|
Configuration class for the PubChemQC PM6 dataset. |
|
Args: |
|
features (dict): A dictionary specifying the features of the dataset. |
|
data_url (str): The URL to download the dataset. |
|
url (str): The URL to the dataset homepage. |
|
citation (str): The citation for the dataset. |
|
**kwargs: Additional keyword arguments. |
|
Attributes: |
|
version (datasets.Version): The version of the dataset. |
|
""" |
|
|
|
def __init__(self, features, url, citation, id_range, **kwargs): |
|
super(PubChemQCPM6Config, self).__init__( |
|
version=datasets.Version("2.0.0"), **kwargs |
|
) |
|
self.features = features |
|
self.url = url |
|
self.citation = citation |
|
self.id_range = id_range |
|
|
|
|
|
class PubChemQCPM6(datasets.GeneratorBasedBuilder): |
|
|
|
BUILDER_CONFIG_CLASS = PubChemQCPM6Config |
|
|
|
DEFAULT_CONFIG_NAME = "pm6opt" |
|
|
|
VERSION = datasets.Version("2.0.0") |
|
|
|
url = "https://huggingface.co/datasets/molssiai-hub/pubchemqc-pm6" |
|
|
|
BUILDER_CONFIGS = [ |
|
PubChemQCPM6Config( |
|
name="pm6opt", |
|
description=_DESCRIPTION, |
|
features=_FEATURE_KEYS, |
|
url=url, |
|
citation=_CITATION, |
|
id_range=_ID_RANGES_PM6OPT, |
|
), |
|
PubChemQCPM6Config( |
|
name="pm6opt_chon300nosalt", |
|
description=_DESCRIPTION, |
|
features=_FEATURE_KEYS, |
|
url=url, |
|
citation=_CITATION, |
|
id_range=_ID_RANGES_PM6OPT_CHON300NOSALT, |
|
), |
|
PubChemQCPM6Config( |
|
name="pm6opt_chon500nosalt", |
|
description=_DESCRIPTION, |
|
features=_FEATURE_KEYS, |
|
url=url, |
|
citation=_CITATION, |
|
id_range=_ID_RANGES_PM6OPT_CHON500NOSALT, |
|
), |
|
PubChemQCPM6Config( |
|
name="pm6opt_chnops500nosalt", |
|
description=_DESCRIPTION, |
|
features=_FEATURE_KEYS, |
|
url=url, |
|
citation=_CITATION, |
|
id_range=_ID_RANGES_PM6OPT_CHNOPS500NOSALT, |
|
), |
|
PubChemQCPM6Config( |
|
name="pm6opt_chnopsfcl300nosalt", |
|
description=_DESCRIPTION, |
|
features=_FEATURE_KEYS, |
|
url=url, |
|
citation=_CITATION, |
|
id_range=_ID_RANGES_PM6OPT_CHNOPSFCL300NOSALT, |
|
), |
|
PubChemQCPM6Config( |
|
name="pm6opt_chnopsfcl500nosalt", |
|
description=_DESCRIPTION, |
|
features=_FEATURE_KEYS, |
|
url=url, |
|
citation=_CITATION, |
|
id_range=_ID_RANGES_PM6OPT_CHNOPSFCL500NOSALT, |
|
), |
|
PubChemQCPM6Config( |
|
name="pm6opt_chnopsfclnakmgca500", |
|
description=_DESCRIPTION, |
|
features=_FEATURE_KEYS, |
|
url=url, |
|
citation=_CITATION, |
|
id_range=_ID_RANGES_PM6OPT_CHNOPSFCLNAKMGCA500, |
|
) |
|
] |
|
|
|
def _info(self): |
|
if self.config.name in _CONFIG_NAMES: |
|
features = _FEATURE_TYPES |
|
else: |
|
raise NotImplementedError("Unknown configuration in _info") |
|
|
|
return datasets.DatasetInfo( |
|
description=_DESCRIPTION, |
|
features=features, |
|
homepage=_HOMEPAGE, |
|
supervised_keys=None, |
|
license=_LICENSE, |
|
citation=_CITATION, |
|
) |
|
|
|
def _split_generators(self, dl_manager): |
|
if self.config.name in _CONFIG_NAMES: |
|
file_list = [] |
|
for range in self.config.id_range: |
|
file_list.append(_BASE_DATA_URL_FORMAT_STR.format( |
|
name=self.config.name, range=range)) |
|
else: |
|
raise NotImplementedError( |
|
"Unknown configuration in _split_generators") |
|
|
|
return [ |
|
datasets.SplitGenerator( |
|
name=datasets.Split.TRAIN, |
|
gen_kwargs={ |
|
"filepaths": dl_manager.download(sorted(file_list)), |
|
}, |
|
) |
|
] |
|
|
|
def _generate_examples(self, filepaths): |
|
if self.config.name in _CONFIG_NAMES: |
|
idx = 0 |
|
for filepath in filepaths: |
|
with open(filepath, "rb") as f: |
|
items = ijson.items(f, "item", use_float=True) |
|
for data in items: |
|
yield idx, data |
|
idx += 1 |
|
else: |
|
raise NotImplementedError( |
|
"Unknown configuration in _generate_examples") |
|
|
