chrom
stringclasses 2
values | pos
int64 10.2k
249M
| ref
stringclasses 4
values | alt
stringclasses 4
values | AC
int64 1
152k
| AN
int64 2
152k
| AF
float64 0
1
| consequence
stringlengths 9
552
| GPN-MSA
float32 -13.59
11.1
|
|---|---|---|---|---|---|---|---|---|
2 | 22,522,316 | C | G | 1 | 151,940 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.096384 |
2 | 22,522,316 | C | T | 2 | 151,940 | 0.000013 | intron_variant&non_coding_transcript_variant | 0.481174 |
2 | 22,522,318 | C | T | 1 | 151,972 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.067448 |
2 | 22,522,319 | A | G | 23 | 152,044 | 0.000151 | intron_variant&non_coding_transcript_variant | -2.159388 |
2 | 22,522,323 | C | T | 1 | 151,904 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.409973 |
2 | 22,522,324 | T | A | 2 | 151,938 | 0.000013 | intron_variant&non_coding_transcript_variant | 0.141171 |
2 | 22,522,326 | G | C | 2 | 151,790 | 0.000013 | intron_variant&non_coding_transcript_variant | 0.424662 |
2 | 22,522,336 | A | G | 1 | 152,044 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.225211 |
2 | 22,522,337 | T | G | 1 | 151,860 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.467739 |
2 | 22,522,338 | G | A | 1 | 151,914 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.072291 |
2 | 22,522,341 | A | G | 1 | 152,052 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.475268 |
2 | 22,522,343 | A | T | 1 | 152,050 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.51601 |
2 | 22,522,344 | A | T | 1 | 152,054 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.579029 |
2 | 22,522,347 | C | A | 1 | 151,798 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.311061 |
2 | 22,522,350 | C | T | 1 | 151,878 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.011408 |
2 | 22,522,352 | C | T | 32 | 151,656 | 0.000211 | intron_variant&non_coding_transcript_variant | 1.916904 |
2 | 22,522,353 | G | A | 774 | 151,738 | 0.005101 | intron_variant&non_coding_transcript_variant | 2.229903 |
2 | 22,522,354 | T | G | 3 | 151,798 | 0.00002 | intron_variant&non_coding_transcript_variant | -0.537281 |
2 | 22,522,365 | A | C | 1 | 152,010 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.78106 |
2 | 22,522,366 | C | G | 1 | 151,670 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.116966 |
2 | 22,522,374 | A | G | 4 | 151,970 | 0.000026 | intron_variant&non_coding_transcript_variant | -0.573539 |
2 | 22,522,379 | T | C | 1 | 151,374 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.519094 |
2 | 22,522,384 | A | C | 5 | 151,940 | 0.000033 | intron_variant&non_coding_transcript_variant | -0.459938 |
2 | 22,522,395 | C | T | 12,418 | 151,732 | 0.081842 | intron_variant&non_coding_transcript_variant | -0.257009 |
2 | 22,522,414 | G | A | 110 | 152,002 | 0.000724 | intron_variant&non_coding_transcript_variant | 0.261821 |
2 | 22,522,426 | G | A | 1 | 151,924 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.585002 |
2 | 22,522,431 | G | T | 1 | 151,978 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.134558 |
2 | 22,522,433 | G | A | 1 | 151,996 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.691362 |
2 | 22,522,437 | G | T | 1 | 152,018 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.447133 |
2 | 22,522,438 | T | C | 2 | 151,924 | 0.000013 | intron_variant&non_coding_transcript_variant | -0.088358 |
2 | 22,522,439 | C | A | 3 | 152,030 | 0.00002 | intron_variant&non_coding_transcript_variant | 0.487836 |
2 | 22,522,448 | C | T | 2 | 152,044 | 0.000013 | intron_variant&non_coding_transcript_variant | 0.472382 |
2 | 22,522,449 | T | C | 5 | 152,046 | 0.000033 | intron_variant&non_coding_transcript_variant | -0.209929 |
2 | 22,522,451 | G | C | 3 | 152,074 | 0.00002 | intron_variant&non_coding_transcript_variant | 0.214449 |
2 | 22,522,478 | A | G | 4 | 152,180 | 0.000026 | intron_variant&non_coding_transcript_variant | 0.150043 |
2 | 22,522,483 | A | G | 1 | 151,928 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.318386 |
2 | 22,522,489 | T | C | 2 | 152,112 | 0.000013 | intron_variant&non_coding_transcript_variant | -0.021176 |
2 | 22,522,489 | T | G | 1 | 152,112 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.070282 |
2 | 22,522,490 | T | A | 1 | 152,036 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.272299 |
2 | 22,522,490 | T | C | 1 | 152,036 | 0.000007 | intron_variant&non_coding_transcript_variant | -1.997718 |
2 | 22,522,490 | T | G | 1 | 152,036 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.224758 |
2 | 22,522,495 | C | G | 1 | 152,114 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.239988 |
2 | 22,522,496 | A | G | 1 | 152,162 | 0.000007 | intron_variant&non_coding_transcript_variant | -2.48491 |
2 | 22,522,500 | C | A | 1 | 151,986 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.336568 |
2 | 22,522,500 | C | G | 1 | 151,988 | 0.000007 | intron_variant&non_coding_transcript_variant | -2.32215 |
2 | 22,522,501 | A | C | 3 | 152,120 | 0.00002 | intron_variant&non_coding_transcript_variant | -0.426864 |
2 | 22,522,511 | T | C | 4 | 152,116 | 0.000026 | intron_variant&non_coding_transcript_variant | 0.109435 |
2 | 22,522,511 | T | G | 2 | 152,116 | 0.000013 | intron_variant&non_coding_transcript_variant | 0.274414 |
2 | 22,522,522 | G | A | 1 | 152,066 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.646032 |
2 | 22,522,530 | A | G | 1 | 152,146 | 0.000007 | intron_variant&non_coding_transcript_variant | -2.769568 |
2 | 22,522,531 | G | A | 9,211 | 151,966 | 0.060612 | intron_variant&non_coding_transcript_variant | 0.319151 |
2 | 22,522,539 | T | G | 1 | 152,118 | 0.000007 | intron_variant&non_coding_transcript_variant | -2.556051 |
2 | 22,522,556 | T | C | 2 | 152,090 | 0.000013 | intron_variant&non_coding_transcript_variant | -1.937293 |
2 | 22,522,559 | G | A | 23 | 151,914 | 0.000151 | intron_variant&non_coding_transcript_variant | 0.285394 |
2 | 22,522,562 | A | C | 22 | 152,144 | 0.000145 | intron_variant&non_coding_transcript_variant | -0.778818 |
2 | 22,522,562 | A | G | 1 | 152,146 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.677533 |
2 | 22,522,571 | A | G | 1 | 152,128 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.299907 |
2 | 22,522,574 | A | T | 1 | 152,086 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.219657 |
2 | 22,522,583 | C | T | 5 | 152,060 | 0.000033 | intron_variant&non_coding_transcript_variant | -0.097693 |
2 | 22,522,587 | A | G | 2 | 152,144 | 0.000013 | intron_variant&non_coding_transcript_variant | -2.726022 |
2 | 22,522,589 | C | A | 11 | 151,948 | 0.000072 | intron_variant&non_coding_transcript_variant | 0.795881 |
2 | 22,522,589 | C | G | 2 | 151,948 | 0.000013 | intron_variant&non_coding_transcript_variant | -0.018639 |
2 | 22,522,589 | C | T | 196 | 151,946 | 0.00129 | intron_variant&non_coding_transcript_variant | -0.194933 |
2 | 22,522,596 | C | A | 5 | 152,040 | 0.000033 | intron_variant&non_coding_transcript_variant | 0.762146 |
2 | 22,522,626 | C | T | 95 | 152,106 | 0.000625 | intron_variant&non_coding_transcript_variant | 0.398034 |
2 | 22,522,627 | T | C | 20 | 152,096 | 0.000131 | intron_variant&non_coding_transcript_variant | 0.047523 |
2 | 22,522,627 | T | G | 3 | 152,098 | 0.00002 | intron_variant&non_coding_transcript_variant | -2.069506 |
2 | 22,522,628 | A | G | 1 | 152,174 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.087332 |
2 | 22,522,630 | T | G | 5 | 152,120 | 0.000033 | intron_variant&non_coding_transcript_variant | -0.424057 |
2 | 22,522,636 | T | C | 25 | 152,142 | 0.000164 | intron_variant&non_coding_transcript_variant | -0.04178 |
2 | 22,522,637 | T | C | 1 | 152,170 | 0.000007 | intron_variant&non_coding_transcript_variant | -2.138901 |
2 | 22,522,637 | T | G | 2 | 152,170 | 0.000013 | intron_variant&non_coding_transcript_variant | -0.041502 |
2 | 22,522,645 | A | G | 2 | 152,202 | 0.000013 | intron_variant&non_coding_transcript_variant | -0.618334 |
2 | 22,522,648 | G | A | 1 | 152,086 | 0.000007 | intron_variant&non_coding_transcript_variant | 1.098336 |
2 | 22,522,658 | C | G | 2 | 152,036 | 0.000013 | intron_variant&non_coding_transcript_variant | -0.030179 |
2 | 22,522,662 | A | G | 1 | 152,136 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.52473 |
2 | 22,522,667 | C | A | 1 | 152,130 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.427601 |
2 | 22,522,668 | T | C | 83 | 151,906 | 0.000546 | intron_variant&non_coding_transcript_variant | 0.132015 |
2 | 22,522,670 | A | T | 1 | 152,162 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.17429 |
2 | 22,522,675 | C | T | 1 | 152,134 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.12255 |
2 | 22,522,676 | A | C | 2 | 152,144 | 0.000013 | intron_variant&non_coding_transcript_variant | -0.176489 |
2 | 22,522,676 | A | G | 1 | 152,144 | 0.000007 | intron_variant&non_coding_transcript_variant | -2.225583 |
2 | 22,522,679 | G | C | 1 | 151,948 | 0.000007 | intron_variant&non_coding_transcript_variant | -1.968945 |
2 | 22,522,682 | C | T | 62 | 151,762 | 0.000409 | intron_variant&non_coding_transcript_variant | 0.158465 |
2 | 22,522,683 | C | G | 61 | 151,778 | 0.000402 | intron_variant&non_coding_transcript_variant | -1.924558 |
2 | 22,522,691 | C | A | 10 | 152,036 | 0.000066 | intron_variant&non_coding_transcript_variant | 0.606134 |
2 | 22,522,693 | T | G | 1 | 152,038 | 0.000007 | intron_variant&non_coding_transcript_variant | -2.265557 |
2 | 22,522,695 | T | G | 3 | 152,076 | 0.00002 | intron_variant&non_coding_transcript_variant | -2.316959 |
2 | 22,522,699 | A | G | 1 | 152,156 | 0.000007 | intron_variant&non_coding_transcript_variant | -0.280654 |
2 | 22,522,701 | G | A | 1 | 152,048 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.652316 |
2 | 22,522,718 | G | A | 1 | 152,044 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.07811 |
2 | 22,522,719 | C | T | 5 | 152,070 | 0.000033 | intron_variant&non_coding_transcript_variant | 0.119533 |
2 | 22,522,724 | T | G | 86 | 151,688 | 0.000567 | intron_variant&non_coding_transcript_variant | 0.117353 |
2 | 22,522,729 | T | C | 1 | 151,958 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.35898 |
2 | 22,522,736 | G | C | 1 | 152,012 | 0.000007 | intron_variant&non_coding_transcript_variant | -1.913674 |
2 | 22,522,739 | T | C | 2 | 151,850 | 0.000013 | intron_variant&non_coding_transcript_variant | 0.279482 |
2 | 22,522,742 | A | C | 63 | 152,158 | 0.000414 | intron_variant&non_coding_transcript_variant | -0.722702 |
2 | 22,522,757 | C | T | 1 | 151,532 | 0.000007 | intron_variant&non_coding_transcript_variant | 0.085617 |
2 | 22,522,765 | G | A | 63 | 152,054 | 0.000414 | intron_variant&non_coding_transcript_variant | 0.062355 |
2 | 22,522,768 | C | T | 10 | 152,066 | 0.000066 | intron_variant&non_coding_transcript_variant | 0.033933 |