Mimic4Dataset / cohort.py
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import ipywidgets as widgets
import sys
from pathlib import Path
import os
import importlib
import shutil
import time
import yaml
def task_cohort(task,mimic_path,path_benchmark, config):
root_dir = path_benchmark
sys.path.append(path_benchmark+'/preprocessing/day_intervals_preproc')
sys.path.append(path_benchmark+'/utils')
sys.path.append(path_benchmark+'/preprocessing/hosp_module_preproc')
sys.path.append(path_benchmark+'/model')
import day_intervals_cohort_v2
import day_intervals_cohort
import feature_selection_icu
#import data_generation_icu_modify
version_path = mimic_path
version = version_path.split('/')[-1][0]
start = time.time()