Update Mimic4Dataset.py
Browse files- Mimic4Dataset.py +2 -1
Mimic4Dataset.py
CHANGED
@@ -249,6 +249,7 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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self.feat_cond, self.feat_chart, self.feat_proc, self.feat_meds, self.feat_out,self.path = self.create_cohort()
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if self.encoding:
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X_train_encoded=generate_split(self.path+'/train_data.pkl',self.config.name,True,self.feat_cond, self.feat_chart, self.feat_proc, self.feat_meds, self.feat_out)
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X_test_encoded=generate_split(self.path+'/test_data.pkl',self.config.name,True,self.feat_cond, self.feat_chart, self.feat_proc, self.feat_meds, self.feat_out)
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@@ -258,7 +259,7 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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X_test_encoded.to_csv(self.path+"/X_test_encoded.csv", index=False)
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X_val_encoded.to_csv(self.path+"/X_val_encoded.csv", index=False)
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-
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BUILDER_CONFIGS = [
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Mimic4DatasetConfig(
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self.feat_cond, self.feat_chart, self.feat_proc, self.feat_meds, self.feat_out,self.path = self.create_cohort()
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super().__init__(**kwargs)
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if self.encoding:
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X_train_encoded=generate_split(self.path+'/train_data.pkl',self.config.name,True,self.feat_cond, self.feat_chart, self.feat_proc, self.feat_meds, self.feat_out)
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X_test_encoded=generate_split(self.path+'/test_data.pkl',self.config.name,True,self.feat_cond, self.feat_chart, self.feat_proc, self.feat_meds, self.feat_out)
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X_test_encoded.to_csv(self.path+"/X_test_encoded.csv", index=False)
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X_val_encoded.to_csv(self.path+"/X_val_encoded.csv", index=False)
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+
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BUILDER_CONFIGS = [
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Mimic4DatasetConfig(
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