Update Mimic4Dataset.py

Mimic4Dataset.py

@@ -106,7 +106,6 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
         print('mimic_complete_path : ',mimic_complete_path)
         print('mimic_folder : ',mimic_folder)
         print('self.mimic_path : ',self.mimic_path)
-        print('version : ',version)
 
         current_directory = os.getcwd()
         if os.path.exists(os.path.dirname(current_directory)+'/MIMIC-IV-Data-Pipeline-main'):
@@ -157,6 +156,7 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
         timeW = config['timeWindow']
         self.timeW=int(timeW.split()[1])
         self.bucket = config['timebucket']
+        self.predW = config['predW']
         self.data_icu = config['icu_no_icu']=='ICU'
         
         if self.data_icu:
@@ -208,31 +208,29 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
         train_path = dict_dir+'/train_data.pkl'
         test_path = dict_dir+'/test_data.pkl'
         
-        
         with open(train_path, 'wb') as f:
             pickle.dump(train_dic, f)
-        
         with open(test_path, 'wb') as f:
             pickle.dump(test_dic, f)
-
         return dict_dir
     
+
     def verif_dim_tensor(self, proc, out, chart, meds, lab):
         verif=True
         if self.feat_proc:
-            if (len(proc)<(self.timeW//self.bucket)):
+            if (len(proc)!=((self.timeW + self.predW)//self.bucket)):
                 verif=False
         if self.feat_out:
-            if (len(out)<(self.timeW//self.bucket)):
+            if (len(out)!=((self.timeW + self.predW)//self.bucket)):
                 verif=False
         if self.feat_chart:
-            if (len(chart)<(self.timeW//self.bucket)):
+            if (len(chart)!=((self.timeW + self.predW)//self.bucket)):
                 verif=False
         if self.feat_meds:
-            if (len(meds)<(self.timeW//self.bucket)):
+            if (len(meds)!=((self.timeW + self.predW)//self.bucket)):
                 verif=False
         if self.feat_lab:
-            if (len(lab)<(self.timeW//self.bucket)):
+            if (len(lab)!=((self.timeW + self.predW)//self.bucket)):
                 verif=False
         return verif
 
@@ -449,7 +447,7 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
             X= generate_ml(dyn_df,cond_df,demo,concat_cols,self.concat)
             X=X.values.tolist()[0]
 
-            size_concat = self.size_cond+ self.size_proc * ((self.timeW//self.bucket)+1) + self.size_meds* ((self.timeW//self.bucket)+1)+ self.size_out* ((self.timeW//self.bucket)+1)+ self.size_chart* ((self.timeW//self.bucket)+1)+ self.size_lab* ((self.timeW//self.bucket)+1) + 4
+            size_concat = self.size_cond+ self.size_proc * ((self.timeW + self.predW)//self.bucket) + self.size_meds * ((self.timeW + self.predW)//self.bucket)+ self.size_out * ((self.timeW + self.predW)//self.bucket)+ self.size_chart * ((self.timeW + self.predW)//self.bucket)+ self.size_lab * ((self.timeW + self.predW)//self.bucket) + 4
             size_aggreg = self.size_cond+ self.size_proc + self.size_meds+ self.size_out+ self.size_chart+ self.size_lab + 4
             
             if (len(X)==size_concat or len(X)==size_aggreg):