thbndi commited on
Commit
9a99a31
·
1 Parent(s): e12ca57

Update Mimic4Dataset.py

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Files changed (1) hide show
  1. Mimic4Dataset.py +2 -7
Mimic4Dataset.py CHANGED
@@ -401,9 +401,7 @@ def getXY_deep(data,task,feat_cond,feat_proc,feat_out,feat_chart,feat_meds):
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  else:
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  stat_df = stat
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- print('label')
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  y = int(demo['label'])
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- print('demo')
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  demo["gender"].replace(gender_vocab, inplace=True)
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  demo["ethnicity"].replace(eth_vocab, inplace=True)
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  demo["insurance"].replace(ins_vocab, inplace=True)
@@ -411,21 +409,18 @@ def getXY_deep(data,task,feat_cond,feat_proc,feat_out,feat_chart,feat_meds):
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  demo=demo[["gender","ethnicity","insurance","Age"]]
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  demo = demo.values
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  demo = torch.tensor(demo)
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- print('concat demo')
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  if demo_df[0].nelement():
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  demo_df = torch.cat((demo_df,demo),0)
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  else:
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  demo_df = demo
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- print('stat2')
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  stat_df = torch.tensor(stat_df)
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  stat_df = stat_df.type(torch.LongTensor)
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- print('demo2')
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  demo_df = torch.tensor(demo_df)
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  demo_df = demo_df.type(torch.LongTensor)
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- print('label2')
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  y_df = torch.tensor(y)
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  y_df = y_df.type(torch.LongTensor)
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- print("end")
 
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  return stat_df, demo_df, meds, charts, out, proc, lab, y_df
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  def getXY(dyn,stat,demo,concat_cols,concat):
 
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  else:
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  stat_df = stat
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  y = int(demo['label'])
 
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  demo["gender"].replace(gender_vocab, inplace=True)
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  demo["ethnicity"].replace(eth_vocab, inplace=True)
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  demo["insurance"].replace(ins_vocab, inplace=True)
 
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  demo=demo[["gender","ethnicity","insurance","Age"]]
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  demo = demo.values
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  demo = torch.tensor(demo)
 
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  if demo_df[0].nelement():
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  demo_df = torch.cat((demo_df,demo),0)
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  else:
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  demo_df = demo
 
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  stat_df = torch.tensor(stat_df)
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  stat_df = stat_df.type(torch.LongTensor)
 
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  demo_df = torch.tensor(demo_df)
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  demo_df = demo_df.type(torch.LongTensor)
 
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  y_df = torch.tensor(y)
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  y_df = y_df.type(torch.LongTensor)
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+
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+ print(demo_df)
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  return stat_df, demo_df, meds, charts, out, proc, lab, y_df
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  def getXY(dyn,stat,demo,concat_cols,concat):