Update Mimic4Dataset.py
Browse files- Mimic4Dataset.py +5 -4
Mimic4Dataset.py
CHANGED
@@ -135,16 +135,17 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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if self.config.name == 'Readmission' and self.config_path is None : self.config_path = _CONFIG_URLS['readmission']
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if self.config.name == 'Length of Stay' and self.config_path is None : self.config_path = _CONFIG_URLS['los']
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if self.config.name == 'Mortality' and self.config_path is None : self.config_path = _CONFIG_URLS['mortality']
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current_directory = os.getcwd()
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if os.path.exists(os.path.dirname(current_directory)+'/MIMIC-IV-Data-Pipeline-main'):
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dir =os.path.dirname(current_directory)
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os.chdir(dir)
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else:
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#move to parent directory of mimic data
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version = self.mimic_path.split('/')[-1]
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m = self.mimic_path.split('/')[-2]
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s='/'+m+'/'+version
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dir = self.mimic_path.replace(s,'')
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if dir[-1]!='/':
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dir=dir+'/'
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if self.config.name == 'Readmission' and self.config_path is None : self.config_path = _CONFIG_URLS['readmission']
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if self.config.name == 'Length of Stay' and self.config_path is None : self.config_path = _CONFIG_URLS['los']
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if self.config.name == 'Mortality' and self.config_path is None : self.config_path = _CONFIG_URLS['mortality']
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version = self.mimic_path.split('/')[-1]
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m = self.mimic_path.split('/')[-2]
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s='/'+m+'/'+version
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current_directory = os.getcwd()
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if os.path.exists(os.path.dirname(current_directory)+'/MIMIC-IV-Data-Pipeline-main'):
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dir =os.path.dirname(current_directory)
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os.chdir(dir)
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else:
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#move to parent directory of mimic data
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dir = self.mimic_path.replace(s,'')
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if dir[-1]!='/':
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dir=dir+'/'
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