thbndi commited on
Commit
d17168a
·
1 Parent(s): 3de01f8

Update cohort.py

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Files changed (1) hide show
  1. cohort.py +2 -2
cohort.py CHANGED
@@ -52,7 +52,7 @@ def task_cohort(task,mimic_path,path_benchmark, config_path):
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  #-----------------------------------------------EXTRACT MIMIC-----------------------------------------------------
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  if version == '2':
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- cohort_output = day_intervals_cohort_v2.extract_data(icu_no_icu,label,tim,icd_code, version_path,disease_label)
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  elif version == '1':
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  cohort_output = day_intervals_cohort.extract_data(icu_no_icu,label,tim,icd_code, version_path,disease_label)
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  end = time.time()
@@ -124,7 +124,7 @@ if __name__ == '__main__':
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  sys.path.append(path_benchmark+'/utils')
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  sys.path.append(path_benchmark+'/preprocessing/hosp_module_preproc')
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  sys.path.append(path_benchmark+'/model')
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- import day_intervals_cohort_v2
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  import day_intervals_cohort
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  import feature_selection_icu
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  import data_generation_icu_modify
 
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  #-----------------------------------------------EXTRACT MIMIC-----------------------------------------------------
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  if version == '2':
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+ cohort_output = day_intervals_cohort_v22.extract_data(icu_no_icu,label,tim,icd_code, version_path,disease_label)
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  elif version == '1':
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  cohort_output = day_intervals_cohort.extract_data(icu_no_icu,label,tim,icd_code, version_path,disease_label)
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  end = time.time()
 
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  sys.path.append(path_benchmark+'/utils')
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  sys.path.append(path_benchmark+'/preprocessing/hosp_module_preproc')
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  sys.path.append(path_benchmark+'/model')
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+ import day_intervals_cohort_v22
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  import day_intervals_cohort
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  import feature_selection_icu
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  import data_generation_icu_modify