Update Mimic4Dataset.py
Browse files- Mimic4Dataset.py +2 -1
Mimic4Dataset.py
CHANGED
@@ -179,7 +179,8 @@ class Mimic4Dataset(datasets.GeneratorBasedBuilder):
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data_dir = path_bench + "/data/dataDic"
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sys.path.append(path_bench)
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config = self.config_path.split('/')[-1]
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-
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os.system(script)
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return [
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datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": data_dir}),
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data_dir = path_bench + "/data/dataDic"
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sys.path.append(path_bench)
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config = self.config_path.split('/')[-1]
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os.chdir(path_bench)
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script = 'python cohort.py '+ self.config.name +" "+ self.mimic_path+ " "+path_bench+ " "+config
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os.system(script)
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return [
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datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": data_dir}),
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