silpakanneganti
commited on
Commit
·
b08c456
1
Parent(s):
bceb959
Training in progress, epoch 1
Browse files- .gitignore +1 -0
- config.json +108 -0
- pytorch_model.bin +3 -0
- runs/Jun14_06-13-23_u116734/1686748413.4558046/events.out.tfevents.1686748413.u116734.308455.5 +3 -0
- runs/Jun14_06-13-23_u116734/events.out.tfevents.1686748413.u116734.308455.4 +3 -0
- special_tokens_map.json +7 -0
- tokenizer.json +0 -0
- tokenizer_config.json +13 -0
- training_args.bin +3 -0
- vocab.txt +0 -0
.gitignore
ADDED
@@ -0,0 +1 @@
|
|
|
|
|
1 |
+
checkpoint-*/
|
config.json
ADDED
@@ -0,0 +1,108 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"_name_or_path": "bert-base-cased",
|
3 |
+
"architectures": [
|
4 |
+
"BertForTokenClassification"
|
5 |
+
],
|
6 |
+
"attention_probs_dropout_prob": 0.1,
|
7 |
+
"classifier_dropout": null,
|
8 |
+
"gradient_checkpointing": false,
|
9 |
+
"hidden_act": "gelu",
|
10 |
+
"hidden_dropout_prob": 0.1,
|
11 |
+
"hidden_size": 768,
|
12 |
+
"id2label": {
|
13 |
+
"0": "O",
|
14 |
+
"1": "Age",
|
15 |
+
"2": "Sex",
|
16 |
+
"3": "Clinical_event",
|
17 |
+
"4": "Nonbiological_location",
|
18 |
+
"5": "Duration",
|
19 |
+
"6": "Severity",
|
20 |
+
"7": "Biological_structure",
|
21 |
+
"8": "Sign_symptom",
|
22 |
+
"9": "History",
|
23 |
+
"10": "Lab_value",
|
24 |
+
"11": "Therapeutic_procedure",
|
25 |
+
"12": "Diagnostic_procedure",
|
26 |
+
"13": "Personal_background",
|
27 |
+
"14": "Date",
|
28 |
+
"15": "Disease_disorder",
|
29 |
+
"16": "Volume",
|
30 |
+
"17": "Frequency",
|
31 |
+
"18": "Detailed_description",
|
32 |
+
"19": "Occupation",
|
33 |
+
"20": "Activity",
|
34 |
+
"21": "Qualitative_concept",
|
35 |
+
"22": "Subject",
|
36 |
+
"23": "Distance",
|
37 |
+
"24": "Other_event",
|
38 |
+
"25": "Medication",
|
39 |
+
"26": "Family_history",
|
40 |
+
"27": "Dosage",
|
41 |
+
"28": "Color",
|
42 |
+
"29": "Time",
|
43 |
+
"30": "Outcome",
|
44 |
+
"31": "Biological_attribute",
|
45 |
+
"32": "Quantitative_concept",
|
46 |
+
"33": "Texture",
|
47 |
+
"34": "Coreference",
|
48 |
+
"35": "Shape",
|
49 |
+
"36": "Height",
|
50 |
+
"37": "Mass",
|
51 |
+
"38": "Area"
|
52 |
+
},
|
53 |
+
"initializer_range": 0.02,
|
54 |
+
"intermediate_size": 3072,
|
55 |
+
"label2id": {
|
56 |
+
"Activity": 20,
|
57 |
+
"Age": 1,
|
58 |
+
"Area": 38,
|
59 |
+
"Biological_attribute": 31,
|
60 |
+
"Biological_structure": 7,
|
61 |
+
"Clinical_event": 3,
|
62 |
+
"Color": 28,
|
63 |
+
"Coreference": 34,
|
64 |
+
"Date": 14,
|
65 |
+
"Detailed_description": 18,
|
66 |
+
"Diagnostic_procedure": 12,
|
67 |
+
"Disease_disorder": 15,
|
68 |
+
"Distance": 23,
|
69 |
+
"Dosage": 27,
|
70 |
+
"Duration": 5,
|
71 |
+
"Family_history": 26,
|
72 |
+
"Frequency": 17,
|
73 |
+
"Height": 36,
|
74 |
+
"History": 9,
|
75 |
+
"Lab_value": 10,
|
76 |
+
"Mass": 37,
|
77 |
+
"Medication": 25,
|
78 |
+
"Nonbiological_location": 4,
|
79 |
+
"O": 0,
|
80 |
+
"Occupation": 19,
|
81 |
+
"Other_event": 24,
|
82 |
+
"Outcome": 30,
|
83 |
+
"Personal_background": 13,
|
84 |
+
"Qualitative_concept": 21,
|
85 |
+
"Quantitative_concept": 32,
|
86 |
+
"Severity": 6,
|
87 |
+
"Sex": 2,
|
88 |
+
"Shape": 35,
|
89 |
+
"Sign_symptom": 8,
|
90 |
+
"Subject": 22,
|
91 |
+
"Texture": 33,
|
92 |
+
"Therapeutic_procedure": 11,
|
93 |
+
"Time": 29,
|
94 |
+
"Volume": 16
|
95 |
+
},
|
96 |
+
"layer_norm_eps": 1e-12,
|
97 |
+
"max_position_embeddings": 512,
|
98 |
+
"model_type": "bert",
|
99 |
+
"num_attention_heads": 12,
|
100 |
+
"num_hidden_layers": 12,
|
101 |
+
"pad_token_id": 0,
|
102 |
+
"position_embedding_type": "absolute",
|
103 |
+
"torch_dtype": "float32",
|
104 |
+
"transformers_version": "4.29.2",
|
105 |
+
"type_vocab_size": 2,
|
106 |
+
"use_cache": true,
|
107 |
+
"vocab_size": 28996
|
108 |
+
}
|
pytorch_model.bin
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:af282f6b0a889738a019415a69052d380a51534efaf05cc3a99124006542331d
|
3 |
+
size 431070829
|
runs/Jun14_06-13-23_u116734/1686748413.4558046/events.out.tfevents.1686748413.u116734.308455.5
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:01cb33f40cbd21fc5e6ca914f1bcde41d60ae2e3645d31a267117ce487ba1d35
|
3 |
+
size 5902
|
runs/Jun14_06-13-23_u116734/events.out.tfevents.1686748413.u116734.308455.4
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:743bd37b7e8ee4ec82709e2396c710515ded3a601200c9bdb9a8c637cdd0bb10
|
3 |
+
size 6348
|
special_tokens_map.json
ADDED
@@ -0,0 +1,7 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"cls_token": "[CLS]",
|
3 |
+
"mask_token": "[MASK]",
|
4 |
+
"pad_token": "[PAD]",
|
5 |
+
"sep_token": "[SEP]",
|
6 |
+
"unk_token": "[UNK]"
|
7 |
+
}
|
tokenizer.json
ADDED
The diff for this file is too large to render.
See raw diff
|
|
tokenizer_config.json
ADDED
@@ -0,0 +1,13 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
{
|
2 |
+
"clean_up_tokenization_spaces": true,
|
3 |
+
"cls_token": "[CLS]",
|
4 |
+
"do_lower_case": false,
|
5 |
+
"mask_token": "[MASK]",
|
6 |
+
"model_max_length": 512,
|
7 |
+
"pad_token": "[PAD]",
|
8 |
+
"sep_token": "[SEP]",
|
9 |
+
"strip_accents": null,
|
10 |
+
"tokenize_chinese_chars": true,
|
11 |
+
"tokenizer_class": "BertTokenizer",
|
12 |
+
"unk_token": "[UNK]"
|
13 |
+
}
|
training_args.bin
ADDED
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
1 |
+
version https://git-lfs.github.com/spec/v1
|
2 |
+
oid sha256:a7ceca50e247e57017ea5bdef418c8951501defb832c3491a98321f879cc7d54
|
3 |
+
size 3899
|
vocab.txt
ADDED
The diff for this file is too large to render.
See raw diff
|
|