Update code/alphafold_featureVector.py

code/alphafold_featureVector.py

@@ -392,6 +392,8 @@ def alphafold(input_set, mode, impute):
 
                 st.write('HERE2')
                 st.write(pdb_path)
+                st.write(get_alignments_3D(uniprotID, mod, pdb_path, pdbSequence, 'nan', 'nan', 'nan', mode, Path(path_to_output_files / '3D_alignment'),
+                                     'gzip'))
                 if get_alignments_3D(uniprotID, mod, pdb_path, pdbSequence, 'nan', 'nan', 'nan', mode, Path(path_to_output_files / '3D_alignment'),
                                      'gzip') != None:
                     alignments, coords, resnums_for_sasa = get_alignments_3D(uniprotID, mod, pdb_path, pdbSequence, 'nan',