fatmacankara commited on
Commit
38ea622
·
1 Parent(s): 65d977a

Update ASCARIS.py

Browse files
Files changed (1) hide show
  1. ASCARIS.py +10 -6
ASCARIS.py CHANGED
@@ -31,14 +31,18 @@ st.write('')
31
  st.write('')
32
  st.write('')
33
  st.write('')
34
- mode = 1
35
  with st.form('mform', clear_on_submit=False):
36
  #source = st.selectbox('Select the protein structure resource (1: PDB-SwissModel-Modbase, 2: AlphaFold)',[1,2])
37
-
38
  impute = st.selectbox('Imputation',[True, False])
39
 
40
  input_data = st.text_input('Enter SAV data points (Example: Q9Y4W6-N-432-T)')
 
 
 
41
  parser = argparse.ArgumentParser(description='ASCARIS')
 
42
  #parser.add_argument('-s', '--source_option',
43
  # help='Selection of input structure data.\n 1: PDB Structures (default), 2: AlphaFold Structures',
44
  # default=1)
@@ -49,9 +53,10 @@ with st.form('mform', clear_on_submit=False):
49
  # help='Whether resulting feature vector should be imputed or not. Default True.')
50
 
51
  #args = parser.parse_args()
 
52
  input_set = input_data
 
53
  impute = impute
54
-
55
  submitted = st.form_submit_button(label="Submit", help=None, on_click=None, args=None, kwargs=None, type="secondary", disabled=False, use_container_width=False)
56
  print('*****************************************')
57
  print('Feature vector generation is in progress. \nPlease check log file for updates..')
@@ -62,7 +67,6 @@ with st.form('mform', clear_on_submit=False):
62
  selected_df = pd.DataFrame()
63
  st.write('The online tool may be slow, especially while processing multiple SAVs, please consider using the local programmatic version at https://github.com/HUBioDataLab/ASCARIS/')
64
  if submitted:
65
- st.write('submitted.')
66
  with st.spinner('In progress...This may take a while...'):
67
  try:
68
  if mode == 1:
@@ -76,10 +80,10 @@ if submitted:
76
  except:
77
  selected_df = pd.DataFrame()
78
  pass
79
- st.write('selected_df')
80
- st.write(selected_df)
81
  if selected_df is None:
82
  st.success('Feature vector failed. Check log file.')
 
83
 
84
  else:
85
  if len(selected_df) != 0 :
 
31
  st.write('')
32
  st.write('')
33
  st.write('')
34
+
35
  with st.form('mform', clear_on_submit=False):
36
  #source = st.selectbox('Select the protein structure resource (1: PDB-SwissModel-Modbase, 2: AlphaFold)',[1,2])
37
+ source = 1
38
  impute = st.selectbox('Imputation',[True, False])
39
 
40
  input_data = st.text_input('Enter SAV data points (Example: Q9Y4W6-N-432-T)')
41
+
42
+
43
+
44
  parser = argparse.ArgumentParser(description='ASCARIS')
45
+
46
  #parser.add_argument('-s', '--source_option',
47
  # help='Selection of input structure data.\n 1: PDB Structures (default), 2: AlphaFold Structures',
48
  # default=1)
 
53
  # help='Whether resulting feature vector should be imputed or not. Default True.')
54
 
55
  #args = parser.parse_args()
56
+
57
  input_set = input_data
58
+ mode = 1
59
  impute = impute
 
60
  submitted = st.form_submit_button(label="Submit", help=None, on_click=None, args=None, kwargs=None, type="secondary", disabled=False, use_container_width=False)
61
  print('*****************************************')
62
  print('Feature vector generation is in progress. \nPlease check log file for updates..')
 
67
  selected_df = pd.DataFrame()
68
  st.write('The online tool may be slow, especially while processing multiple SAVs, please consider using the local programmatic version at https://github.com/HUBioDataLab/ASCARIS/')
69
  if submitted:
 
70
  with st.spinner('In progress...This may take a while...'):
71
  try:
72
  if mode == 1:
 
80
  except:
81
  selected_df = pd.DataFrame()
82
  pass
83
+
 
84
  if selected_df is None:
85
  st.success('Feature vector failed. Check log file.')
86
+ st.write('Failed here1')
87
 
88
  else:
89
  if len(selected_df) != 0 :