fatmacankara commited on
Commit
42b9925
·
1 Parent(s): 3fc8ecf

Update code/pdb_featureVector.py

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Files changed (1) hide show
  1. code/pdb_featureVector.py +16 -16
code/pdb_featureVector.py CHANGED
@@ -257,22 +257,22 @@ def pdb(input_set, mode, impute):
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  header = structure.header
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  resolution = header.get('resolution', 'N/A')
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  # Print UniProt IDs, chain ID, and resolution for the current model
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- #for i, chain in enumerate(model, start=1):
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- chain_id = chain.get_id()
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- st.write(f"---- Information for Chain {chain_id} in Model {i} ----")
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- st.write(f"UniProt IDs: {', '.join(uniprot_ids)}")
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- st.write(f"Chain ID: {chain_id}")
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- st.write(f"PDB ID: {search.upper()}")
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- st.write(f"Resolution: {resolution}")
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- st.write(f"Sequence: {sequence}")
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- pdb_fasta.at[index, 'pdbID'] = search
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- pdb_fasta.at[index, 'chain'] = chain_id
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- pdb_fasta.at[index, 'pdbSequence'] = str(sequence)
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- pdb_info.at[index, 'uniprotID'] = ', '.join(uniprot_ids)
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- pdb_info.at[index, 'pdbID'] = search
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- pdb_info.at[index, 'chain'] = chain_id
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- pdb_info.at[index, 'resolution'] = resolution
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- index += 1
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  print()
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  st.write()
 
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  header = structure.header
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  resolution = header.get('resolution', 'N/A')
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  # Print UniProt IDs, chain ID, and resolution for the current model
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+ for i, chain in enumerate(model, start=1):
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+ chain_id = chain.get_id()
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+ st.write(f"---- Information for Chain {chain_id} in Model {i} ----")
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+ st.write(f"UniProt IDs: {', '.join(uniprot_ids)}")
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+ st.write(f"Chain ID: {chain_id}")
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+ st.write(f"PDB ID: {search.upper()}")
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+ st.write(f"Resolution: {resolution}")
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+ st.write(f"Sequence: {sequence}")
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+ pdb_fasta.at[index, 'pdbID'] = search
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+ pdb_fasta.at[index, 'chain'] = chain_id
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+ pdb_fasta.at[index, 'pdbSequence'] = str(sequence)
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+ pdb_info.at[index, 'uniprotID'] = ', '.join(uniprot_ids)
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+ pdb_info.at[index, 'pdbID'] = search
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+ pdb_info.at[index, 'chain'] = chain_id
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+ pdb_info.at[index, 'resolution'] = resolution
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+ index += 1
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  print()
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  st.write()