fatmacankara commited on
Commit
60854cf
·
1 Parent(s): 5f06ca7

Update code/pdb_featureVector.py

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Files changed (1) hide show
  1. code/pdb_featureVector.py +2 -2
code/pdb_featureVector.py CHANGED
@@ -214,7 +214,7 @@ def pdb(input_set, mode, impute):
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  pass
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  cnt = 0
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- st.write('this is the pdbs', pdbs)
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  def fetch_uniprot_ids(pdb_code):
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  response = requests.get(f"https://www.ebi.ac.uk/pdbe/api/mappings/uniprot/{pdb_code}")
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  st.write('response', response)
@@ -222,7 +222,7 @@ def pdb(input_set, mode, impute):
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  data = response.json()
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  st.write(list(list(list(data.values())[0].values())[0].keys()))
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  return list(list(list(data.values())[0].values())[0].keys())
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-
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  for search in pdbs:
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  # Step 1: Fetch the PDB file
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  pdb_url = f"https://files.rcsb.org/download/{search}.pdb"
 
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  pass
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  cnt = 0
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+ print('this is the pdbs', pdbs)
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  def fetch_uniprot_ids(pdb_code):
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  response = requests.get(f"https://www.ebi.ac.uk/pdbe/api/mappings/uniprot/{pdb_code}")
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  st.write('response', response)
 
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  data = response.json()
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  st.write(list(list(list(data.values())[0].values())[0].keys()))
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  return list(list(list(data.values())[0].values())[0].keys())
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+ print(fetch_uniprot_ids('5K5T'))
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  for search in pdbs:
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  # Step 1: Fetch the PDB file
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  pdb_url = f"https://files.rcsb.org/download/{search}.pdb"