Spaces:
Sleeping
Sleeping
fatmacankara
commited on
Commit
·
7be0f29
1
Parent(s):
6038db7
Update code/add_alignment.py
Browse files- code/add_alignment.py +2 -0
code/add_alignment.py
CHANGED
@@ -18,6 +18,8 @@ def do_alignment(identifier, uniprotSequence, pdbSequence, alignment_path):
|
|
18 |
aligner.open_gap_score = -11
|
19 |
aligner.extend_gap_score = -1
|
20 |
alignments = aligner.align(uniprotSequence, pdbSequence)
|
|
|
|
|
21 |
alignments = (list(alignments))
|
22 |
alignment_list = []
|
23 |
for alignment in alignments:
|
|
|
18 |
aligner.open_gap_score = -11
|
19 |
aligner.extend_gap_score = -1
|
20 |
alignments = aligner.align(uniprotSequence, pdbSequence)
|
21 |
+
print('Alignments')
|
22 |
+
print(alignments)
|
23 |
alignments = (list(alignments))
|
24 |
alignment_list = []
|
25 |
for alignment in alignments:
|