Update code/pdb_featureVector.py

code/pdb_featureVector.py

@@ -1392,24 +1392,15 @@ def pdb(input_set, mode, impute):
             elif data.at[i, 'source'] == 'SWISSMODEL':
                 pdb_path = Path(path_to_output_files / 'swissmodel_structures' / f'{up_id_}_{id_}_{score_}.txt')
 
-            print('I am here. Whats wrong?')
 
             pdbSequence = data.at[i, 'pdbSequence']
             source = data.at[i, 'source']
             chain = data.at[i, 'chain']
             uniprotID = data.at[i, 'uniprotID']
             pdbID = data.at[i, 'pdbID']
-            print('Das ist pdb seq')
-            print(pdbSequence)
-            print(uniprotID)
-            print(pdb_path)
-            print(source)
-            print(chain)
-            print(pdbID)
-            print(mode)
+
             alignments = get_alignments_3D(uniprotID, 'nan', pdb_path, pdbSequence, source, chain, pdbID, mode, Path(path_to_output_files / '3D_alignment'), file_format = 'gzip')
-            print('ALIGNMENTS')
-            print(alignments)
+
             mutPos = data.at[i, 'mutationPositionOnPDB']
             try:
                 coordMut = get_coords(mutPos, alignments, 'nan', 'nan', mode)[0]