fatmacankara commited on
Commit
aba4294
·
1 Parent(s): 5a46c9d

Update code/pdb_featureVector.py

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Files changed (1) hide show
  1. code/pdb_featureVector.py +1 -1
code/pdb_featureVector.py CHANGED
@@ -250,7 +250,7 @@ def pdb(input_set, mode, impute):
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  seqs[i[2]] = i[4:]
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  for key, val in seqs.items():
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- seqs[key] = ''.join([threeToOne(i) for i in val]
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  pdb_data_list = [i for i in pdb_data_list if i.startswith('DBREF')]
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  pdb_data_list = [[list(filter(None,i.split(' '))) for j in i.split(' ') if j == 'UNP'] for i in pdb_data_list]
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  pdb_data_list = [i for i in pdb_data_list if i != []]
 
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  seqs[i[2]] = i[4:]
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  for key, val in seqs.items():
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+ seqs[key] = ''.join([threeToOne(i) for i in val])
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  pdb_data_list = [i for i in pdb_data_list if i.startswith('DBREF')]
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  pdb_data_list = [[list(filter(None,i.split(' '))) for j in i.split(' ') if j == 'UNP'] for i in pdb_data_list]
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  pdb_data_list = [i for i in pdb_data_list if i != []]