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fatmacankara
commited on
Commit
·
d1d665f
1
Parent(s):
cceefd7
Update pdb_featureVector.py
Browse files- pdb_featureVector.py +2 -2
pdb_featureVector.py
CHANGED
@@ -193,7 +193,7 @@ def pdb(input_set, mode, impute):
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pdbs.append(get_pdb_ids(prot))
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if len(pdbs) >= 1:
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pdbs = [item for sublist in pdbs for item in sublist]
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-
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else:
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print('PDB List Empty')
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pdbs = []
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@@ -214,7 +214,7 @@ def pdb(input_set, mode, impute):
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pass
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cnt = 0
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-
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def fetch_uniprot_ids(pdb_code):
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response = requests.get(f"https://www.ebi.ac.uk/pdbe/api/mappings/uniprot/{pdb_code}")
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pdbs.append(get_pdb_ids(prot))
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if len(pdbs) >= 1:
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pdbs = [item for sublist in pdbs for item in sublist]
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+
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else:
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print('PDB List Empty')
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pdbs = []
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pass
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cnt = 0
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+
pdbs = [i.upper() for i in pdbs]
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def fetch_uniprot_ids(pdb_code):
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response = requests.get(f"https://www.ebi.ac.uk/pdbe/api/mappings/uniprot/{pdb_code}")
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