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Anirudh1993
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Delete app.py
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app.py
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@@ -1,284 +0,0 @@
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from utils.check_pydantic_version import use_pydantic_v1
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use_pydantic_v1() #This function has to be run before importing haystack. as haystack requires pydantic v1 to run
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from operator import index
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import streamlit as st
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import logging
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import os
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from annotated_text import annotation
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from json import JSONDecodeError
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from markdown import markdown
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from utils.config import parser
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from utils.haystack import start_document_store, query, initialize_pipeline, start_preprocessor_node, start_retriever, start_reader
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from utils.ui import reset_results, set_initial_state
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import pandas as pd
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import haystack
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from datetime import datetime
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import streamlit.components.v1 as components
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import streamlit_authenticator as stauth
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import pickle
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from streamlit_modal import Modal
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import numpy as np
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names = ['mlreply']
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usernames = ['docwhiz']
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with open('hashed_password.pkl','rb') as f:
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hashed_passwords = pickle.load(f)
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# Whether the file upload should be enabled or not
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DISABLE_FILE_UPLOAD = bool(os.getenv("DISABLE_FILE_UPLOAD"))
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def show_documents_list(retrieved_documents):
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data = []
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for i, document in enumerate(retrieved_documents):
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data.append([document.meta['name']])
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df = pd.DataFrame(data, columns=['Uploaded Document Name'])
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df.drop_duplicates(subset=['Uploaded Document Name'], inplace=True)
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df.index = np.arange(1, len(df) + 1)
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return df
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# Define a function to handle file uploads
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def upload_files():
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uploaded_files = upload_container.file_uploader(
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"upload", type=["pdf", "txt", "docx"], accept_multiple_files=True, label_visibility="hidden", key=1
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)
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return uploaded_files
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# Define a function to process a single file
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def process_file(data_file, preprocesor, document_store):
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# read file and add content
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file_contents = data_file.read().decode("utf-8")
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docs = [{
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'content': str(file_contents),
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'meta': {'name': str(data_file.name)}
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}]
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try:
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names = [item.meta.get('name') for item in document_store.get_all_documents()]
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#if args.store == 'inmemory':
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# doc = converter.convert(file_path=files, meta=None)
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if data_file.name in names:
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print(f"{data_file.name} already processed")
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else:
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print(f'preprocessing uploaded doc {data_file.name}.......')
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#print(data_file.read().decode("utf-8"))
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preprocessed_docs = preprocesor.process(docs)
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print('writing to document store.......')
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document_store.write_documents(preprocessed_docs)
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print('updating emebdding.......')
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document_store.update_embeddings(retriever)
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except Exception as e:
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print(e)
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# Define a function to upload the documents to haystack document store
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def upload_document():
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if data_files is not None:
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for data_file in data_files:
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# Upload file
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if data_file:
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try:
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#raw_json = upload_doc(data_file)
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# Call the process_file function for each uploaded file
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if args.store == 'inmemory':
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processed_data = process_file(data_file, preprocesor, document_store)
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#upload_container.write(str(data_file.name) + " ✅ ")
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except Exception as e:
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upload_container.write(str(data_file.name) + " ❌ ")
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upload_container.write("_This file could not be parsed, see the logs for more information._")
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# Define a function to reset the documents in haystack document store
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def reset_documents():
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print('\nReseting documents list at ' + str(datetime.now()) + '\n')
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st.session_state.data_files = None
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document_store.delete_documents()
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try:
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args = parser.parse_args()
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preprocesor = start_preprocessor_node()
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document_store = start_document_store(type=args.store)
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document_store.get_all_documents()
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retriever = start_retriever(document_store)
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reader = start_reader()
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st.set_page_config(
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page_title="MLReplySearch",
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layout="centered",
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page_icon=":shark:",
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menu_items={
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'Get Help': 'https://www.extremelycoolapp.com/help',
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'Report a bug': "https://www.extremelycoolapp.com/bug",
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'About': "# This is a header. This is an *extremely* cool app!"
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}
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)
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st.sidebar.image("ml_logo.png", use_column_width=True)
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authenticator = stauth.Authenticate(names, usernames, hashed_passwords, "document_search", "random_text", cookie_expiry_days=1)
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name, authentication_status, username = authenticator.login("Login", "main")
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if authentication_status == False:
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st.error("Username/Password is incorrect")
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if authentication_status == None:
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st.warning("Please enter your username and password")
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if authentication_status:
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# Sidebar for Task Selection
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st.sidebar.header('Options:')
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# OpenAI Key Input
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openai_key = st.sidebar.text_input("Enter LLM-authorization Key:", type="password")
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if openai_key:
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task_options = ['Extractive', 'Generative']
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else:
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task_options = ['Extractive']
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task_selection = st.sidebar.radio('Select the task:', task_options)
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# Check the task and initialize pipeline accordingly
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if task_selection == 'Extractive':
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pipeline_extractive = initialize_pipeline("extractive", document_store, retriever, reader)
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elif task_selection == 'Generative' and openai_key: # Check for openai_key to ensure user has entered it
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pipeline_rag = initialize_pipeline("rag", document_store, retriever, reader, openai_key=openai_key)
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set_initial_state()
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modal = Modal("Manage Files", key="demo-modal")
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open_modal = st.sidebar.button("Manage Files", use_container_width=True)
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if open_modal:
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modal.open()
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st.write('# ' + args.name)
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if modal.is_open():
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with modal.container():
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if not DISABLE_FILE_UPLOAD:
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upload_container = st.container()
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data_files = upload_files()
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upload_document()
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st.session_state.sidebar_state = 'collapsed'
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st.table(show_documents_list(document_store.get_all_documents()))
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# File upload block
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# if not DISABLE_FILE_UPLOAD:
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# upload_container = st.sidebar.container()
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# upload_container.write("## File Upload:")
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# data_files = upload_files()
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# Button to update files in the documentStore
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# upload_container.button('Upload Files', on_click=upload_document, args=())
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# Button to reset the documents in DocumentStore
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st.sidebar.button("Reset documents", on_click=reset_documents, args=(), use_container_width=True)
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if "question" not in st.session_state:
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st.session_state.question = ""
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# Search bar
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question = st.text_input("Question", value=st.session_state.question, max_chars=100, on_change=reset_results, label_visibility="hidden")
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run_pressed = st.button("Run")
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run_query = (
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run_pressed or question != st.session_state.question #or task_selection != st.session_state.task
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)
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# Get results for query
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if run_query and question:
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if task_selection == 'Extractive':
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reset_results()
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st.session_state.question = question
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with st.spinner("🔎 Running your pipeline"):
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try:
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st.session_state.results_extractive = query(pipeline_extractive, question)
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st.session_state.task = task_selection
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except JSONDecodeError as je:
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st.error(
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"👓 An error occurred reading the results. Is the document store working?"
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)
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except Exception as e:
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logging.exception(e)
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st.error("🐞 An error occurred during the request.")
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elif task_selection == 'Generative':
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reset_results()
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st.session_state.question = question
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with st.spinner("🔎 Running your pipeline"):
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try:
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st.session_state.results_generative = query(pipeline_rag, question)
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st.session_state.task = task_selection
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except JSONDecodeError as je:
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st.error(
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"👓 An error occurred reading the results. Is the document store working?"
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)
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except Exception as e:
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if "API key is invalid" in str(e):
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logging.exception(e)
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st.error("🐞 incorrect API key provided. You can find your API key at https://platform.openai.com/account/api-keys.")
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else:
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logging.exception(e)
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st.error("🐞 An error occurred during the request.")
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# Display results
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if (st.session_state.results_extractive or st.session_state.results_generative) and run_query:
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# Handle Extractive Answers
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if task_selection == 'Extractive':
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results = st.session_state.results_extractive
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st.subheader("Extracted Answers:")
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if 'answers' in results:
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answers = results['answers']
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treshold = 0.2
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higher_then_treshold = any(ans.score > treshold for ans in answers)
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if not higher_then_treshold:
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st.markdown(f"<span style='color:red'>Please note none of the answers achieved a score higher then {int(treshold) * 100}%. Which probably means that the desired answer is not in the searched documents.</span>", unsafe_allow_html=True)
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for count, answer in enumerate(answers):
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if answer.answer:
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text, context = answer.answer, answer.context
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start_idx = context.find(text)
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end_idx = start_idx + len(text)
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score = round(answer.score, 3)
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st.markdown(f"**Answer {count + 1}:**")
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st.markdown(
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context[:start_idx] + str(annotation(body=text, label=f'SCORE {score}', background='#964448', color='#ffffff')) + context[end_idx:],
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unsafe_allow_html=True,
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)
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else:
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st.info(
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"🤔 Haystack is unsure whether any of the documents contain an answer to your question. Try to reformulate it!"
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)
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# Handle Generative Answers
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elif task_selection == 'Generative':
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results = st.session_state.results_generative
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st.subheader("Generated Answer:")
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if 'results' in results:
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st.markdown("**Answer:**")
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st.write(results['results'][0])
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# Handle Retrieved Documents
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if 'documents' in results:
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retrieved_documents = results['documents']
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st.subheader("Retriever Results:")
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data = []
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for i, document in enumerate(retrieved_documents):
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# Truncate the content
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truncated_content = (document.content[:150] + '...') if len(document.content) > 150 else document.content
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data.append([i + 1, document.meta['name'], truncated_content])
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# Convert data to DataFrame and display using Streamlit
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df = pd.DataFrame(data, columns=['Ranked Context', 'Document Name', 'Content'])
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st.table(df)
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except SystemExit as e:
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os._exit(e.code)
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