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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L01,barcode: GGCTAC,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1156990 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199473,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302323 | GSM1156990 | GSE47774,GSE47792 | 0.006722 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L01_GGCTAC_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302323 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199473 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L02,barcode: GGCTAC,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1156991 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199465,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302324 | GSM1156991 | GSE47774,GSE47792 | 0.008117 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L02_GGCTAC_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302324 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199465 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L02,barcode: GGCTAC,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1156992 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199466,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302325 | GSM1156992 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L02_GGCTAC_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302325 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199466 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L03,barcode: GGCTAC,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1156993 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199472,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302326 | GSM1156993 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L03_GGCTAC_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302326 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199472 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L03,barcode: GGCTAC,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1156994 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199467,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302327 | GSM1156994 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L03_GGCTAC_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302327 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199467 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L04,barcode: GGCTAC,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1156995 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199468,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302328 | GSM1156995 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L04_GGCTAC_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302328 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199468 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L04,barcode: GGCTAC,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1156996 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199475,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302329 | GSM1156996 | GSE47774,GSE47792 | 0.00942 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L04_GGCTAC_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302329 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199475 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L05,barcode: GGCTAC,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1156997 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199469,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302330 | GSM1156997 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L05_GGCTAC_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302330 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199469 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L05,barcode: GGCTAC,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1156998 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199471,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302331 | GSM1156998 | GSE47774,GSE47792 | 0.007239 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L05_GGCTAC_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302331 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199471 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L06,barcode: GGCTAC,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1156999 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199478,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302332 | GSM1156999 | GSE47774,GSE47792 | 0.010281 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L06_GGCTAC_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302332 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199478 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L06,barcode: GGCTAC,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157000 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199470,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302333 | GSM1157000 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L06_GGCTAC_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302333 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199470 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L07,barcode: GGCTAC,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157001 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199476,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302334 | GSM1157001 | GSE47774,GSE47792 | 0.008488 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L07_GGCTAC_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302334 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199476 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L07,barcode: GGCTAC,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157002 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199479,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302335 | GSM1157002 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L07_GGCTAC_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302335 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199479 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L08,barcode: GGCTAC,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157003 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199474,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302336 | GSM1157003 | GSE47774,GSE47792 | 0.020157 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L08_GGCTAC_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302336 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199474 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L08,barcode: GGCTAC,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157004 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199504,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302337 | GSM1157004 | GSE47774,GSE47792 | 0.00942 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_3_L08_GGCTAC_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302337 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199504 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L01,barcode: ATGTCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157005 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302338,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200429 | GSM1157005 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L01_ATGTCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302338 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200429 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L01,barcode: ATGTCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157006 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302339,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200430 | GSM1157006 | GSE47774,GSE47792 | 0.010315 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L01_ATGTCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302339 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200430 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L02,barcode: ATGTCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157007 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199483,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302340 | GSM1157007 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L02_ATGTCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302340 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199483 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L02,barcode: ATGTCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157008 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199477,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302341 | GSM1157008 | GSE47774,GSE47792 | 0.009505 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L02_ATGTCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302341 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199477 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L03,barcode: ATGTCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157009 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02199480,SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302342 | GSM1157009 | GSE47774,GSE47792 | 0.0004 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L03_ATGTCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302342 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02199480 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L03,barcode: ATGTCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157010 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302343,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200424 | GSM1157010 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L03_ATGTCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302343 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200424 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L04,barcode: ATGTCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157011 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302344,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200425 | GSM1157011 | GSE47774,GSE47792 | 0.007239 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L04_ATGTCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302344 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200425 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L04,barcode: ATGTCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157012 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302345,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200427 | GSM1157012 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L04_ATGTCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302345 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200427 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L05,barcode: ATGTCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157013 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302346,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200426 | GSM1157013 | GSE47774,GSE47792 | 0.008301 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L05_ATGTCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302346 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200426 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L05,barcode: ATGTCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157014 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302347,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200428 | GSM1157014 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L05_ATGTCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302347 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200428 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L06,barcode: ATGTCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157015 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302348,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200431 | GSM1157015 | GSE47774,GSE47792 | 0.001795 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L06_ATGTCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302348 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200431 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L06,barcode: ATGTCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157016 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302349,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200433 | GSM1157016 | GSE47774,GSE47792 | 0.014566 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L06_ATGTCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302349 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200433 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L07,barcode: ATGTCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157017 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302350,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200432 | GSM1157017 | GSE47774,GSE47792 | 0.009134 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L07_ATGTCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302350 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200432 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L07,barcode: ATGTCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157018 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302351,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200434 | GSM1157018 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L07_ATGTCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302351 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200434 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L08,barcode: ATGTCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157019 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302352,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200436 | GSM1157019 | GSE47774,GSE47792 | 0.011186 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L08_ATGTCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302352 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200436 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L08,barcode: ATGTCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157020 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302353,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200435 | GSM1157020 | GSE47774,GSE47792 | 0.01577 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_4_L08_ATGTCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302353 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200435 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L01,barcode: ACTGAT,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157021 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302354,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200437 | GSM1157021 | GSE47774,GSE47792 | 0.007039 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L01_ACTGAT_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302354 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200437 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L01,barcode: ACTGAT,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157022 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302355,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200439 | GSM1157022 | GSE47774,GSE47792 | 0.008759 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L01_ACTGAT_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302355 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200439 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L02,barcode: ACTGAT,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157023 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302356,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200438 | GSM1157023 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L02_ACTGAT_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302356 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200438 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L02,barcode: ACTGAT,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157024 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302357,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200441 | GSM1157024 | GSE47774,GSE47792 | 0.007239 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L02_ACTGAT_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302357 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200441 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L03,barcode: ACTGAT,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157025 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302358,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200443 | GSM1157025 | GSE47774,GSE47792 | 0.014089 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L03_ACTGAT_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302358 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200443 |
|
1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L03,barcode: ACTGAT,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157026 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302359,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200440 | GSM1157026 | GSE47774,GSE47792 | 0.008205 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L03_ACTGAT_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302359 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200440 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L04,barcode: ACTGAT,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157027 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302360,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200445 | GSM1157027 | GSE47774,GSE47792 | 0.008205 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L04_ACTGAT_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302360 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200445 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L04,barcode: ACTGAT,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157028 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302361,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200446 | GSM1157028 | GSE47774,GSE47792 | 0.008621 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L04_ACTGAT_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302361 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200446 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L05,barcode: ACTGAT,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157029 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302362,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200442 | GSM1157029 | GSE47774,GSE47792 | 0.007738 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L05_ACTGAT_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302362 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200442 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L05,barcode: ACTGAT,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157030 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302363,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200444 | GSM1157030 | GSE47774,GSE47792 | 0.008891 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L05_ACTGAT_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302363 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200444 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L06,barcode: ACTGAT,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157031 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302364,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200449 | GSM1157031 | GSE47774,GSE47792 | 0.014592 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L06_ACTGAT_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302364 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200449 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L06,barcode: ACTGAT,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157032 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302365,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200447 | GSM1157032 | GSE47774,GSE47792 | 0.008242 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L06_ACTGAT_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302365 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200447 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L07,barcode: ACTGAT,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157033 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302366,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200448 | GSM1157033 | GSE47774,GSE47792 | 0.008242 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L07_ACTGAT_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302366 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200448 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L07,barcode: ACTGAT,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157034 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302367,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200451 | GSM1157034 | GSE47774,GSE47792 | 0.007743 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L07_ACTGAT_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302367 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200451 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L08,barcode: ACTGAT,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157035 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302368,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200450 | GSM1157035 | GSE47774,GSE47792 | 0.013576 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L08_ACTGAT_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302368 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200450 |
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1 | seqc sample: C,platform: Illumina HiSeq 2000,site: BGI,library id: 5,lane: L08,barcode: ACTGAT,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157036 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302369,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200349 | GSM1157036 | GSE47774,GSE47792 | 0.009108 | Mix of Sample A (UHRR) and Sample B (HBRR) (3:1) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_C_5_L08_ACTGAT_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302369 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200349 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L01,barcode: TGACCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157037 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302370,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200452 | GSM1157037 | GSE47774,GSE47792 | 0.005658 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L01_TGACCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302370 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200452 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L01,barcode: TGACCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157038 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302371,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200331 | GSM1157038 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L01_TGACCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302371 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200331 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L02,barcode: TGACCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157039 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302372,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200354 | GSM1157039 | GSE47774,GSE47792 | 0.005518 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L02_TGACCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302372 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200354 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L02,barcode: TGACCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157040 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302373,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200374 | GSM1157040 | GSE47774,GSE47792 | 0.006722 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L02_TGACCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302373 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200374 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L03,barcode: TGACCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157041 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302374,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200342 | GSM1157041 | GSE47774,GSE47792 | 0.008992 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L03_TGACCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302374 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200342 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L03,barcode: TGACCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157042 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302375,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200365 | GSM1157042 | GSE47774,GSE47792 | 0.008433 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L03_TGACCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302375 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200365 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L04,barcode: TGACCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157043 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302376,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200394 | GSM1157043 | GSE47774,GSE47792 | 0.061138 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L04_TGACCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302376 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200394 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L04,barcode: TGACCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157044 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302377,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200366 | GSM1157044 | GSE47774,GSE47792 | 0.008433 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L04_TGACCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302377 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200366 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L05,barcode: TGACCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157045 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302378,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200400 | GSM1157045 | GSE47774,GSE47792 | 0.009636 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L05_TGACCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302378 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200400 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L05,barcode: TGACCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157046 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302379,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200347 | GSM1157046 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L05_TGACCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302379 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200347 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L06,barcode: TGACCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157047 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302380,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200367 | GSM1157047 | GSE47774,GSE47792 | 0.005518 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L06_TGACCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302380 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200367 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L06,barcode: TGACCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157048 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302381,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200401 | GSM1157048 | GSE47774,GSE47792 | 0.008488 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L06_TGACCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302381 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200401 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L07,barcode: TGACCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157049 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302382,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200357 | GSM1157049 | GSE47774,GSE47792 | 0.008488 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L07_TGACCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302382 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200357 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L07,barcode: TGACCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157050 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302383,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200373 | GSM1157050 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L07_TGACCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302383 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200373 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L08,barcode: TGACCA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157051 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302384,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200408 | GSM1157051 | GSE47774,GSE47792 | 0.009916 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L08_TGACCA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302384 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200408 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 1,lane: L08,barcode: TGACCA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157052 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302385,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200355 | GSM1157052 | GSE47774,GSE47792 | 0.007285 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_1_L08_TGACCA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302385 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200355 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L01,barcode: ACTTGA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157053 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302386,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200381 | GSM1157053 | GSE47774,GSE47792 | 0.00868 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L01_ACTTGA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302386 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200381 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L01,barcode: ACTTGA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157054 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302387,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200409 | GSM1157054 | GSE47774,GSE47792 | 0.008936 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L01_ACTTGA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302387 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200409 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L02,barcode: ACTTGA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157055 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302388,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200356 | GSM1157055 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L02_ACTTGA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302388 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200356 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L02,barcode: ACTTGA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157056 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302389,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200380 | GSM1157056 | GSE47774,GSE47792 | 0.008433 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L02_ACTTGA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302389 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200380 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L03,barcode: ACTTGA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157057 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302390,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200410 | GSM1157057 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L03_ACTTGA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302390 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200410 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L03,barcode: ACTTGA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157058 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302391,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200358 | GSM1157058 | GSE47774,GSE47792 | 0.009285 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L03_ACTTGA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302391 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200358 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L04,barcode: ACTTGA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157059 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302392,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200382 | GSM1157059 | GSE47774,GSE47792 | 0.015342 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L04_ACTTGA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302392 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200382 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L04,barcode: ACTTGA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157060 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302393,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200391 | GSM1157060 | GSE47774,GSE47792 | 0.01649 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L04_ACTTGA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302393 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200391 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L05,barcode: ACTTGA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157061 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302394,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200413 | GSM1157061 | GSE47774,GSE47792 | 0.009636 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L05_ACTTGA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302394 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200413 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L05,barcode: ACTTGA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157062 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302395,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200411 | GSM1157062 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L05_ACTTGA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302395 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200411 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L06,barcode: ACTTGA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157063 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302396,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200362 | GSM1157063 | GSE47774,GSE47792 | 0.008992 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L06_ACTTGA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302396 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200362 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L06,barcode: ACTTGA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157064 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302397,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200412 | GSM1157064 | GSE47774,GSE47792 | 0.00643 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L06_ACTTGA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302397 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200412 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L07,barcode: ACTTGA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157065 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302398,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200360 | GSM1157065 | GSE47774,GSE47792 | 0.009636 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L07_ACTTGA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302398 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200360 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L07,barcode: ACTTGA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157066 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302399,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200388 | GSM1157066 | GSE47774,GSE47792 | 0.00717 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L07_ACTTGA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302399 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200388 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L08,barcode: ACTTGA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157067 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302400,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200372 | GSM1157067 | GSE47774,GSE47792 | 0.015455 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L08_ACTTGA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302400 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200372 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 2,lane: L08,barcode: ACTTGA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157068 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302401,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200387 | GSM1157068 | GSE47774,GSE47792 | 0.006666 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_2_L08_ACTTGA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302401 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200387 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L01,barcode: CTTGTA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157069 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302402,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200414 | GSM1157069 | GSE47774,GSE47792 | 0.008488 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L01_CTTGTA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302402 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200414 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L01,barcode: CTTGTA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157070 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302403,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200378 | GSM1157070 | GSE47774,GSE47792 | 0.006722 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L01_CTTGTA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302403 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200378 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L02,barcode: CTTGTA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157071 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302404,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200390 | GSM1157071 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L02_CTTGTA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302404 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200390 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L02,barcode: CTTGTA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157072 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302405,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200415 | GSM1157072 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L02_CTTGTA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302405 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200415 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L03,barcode: CTTGTA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157073 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302406,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200377 | GSM1157073 | GSE47774,GSE47792 | 0.000531 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L03_CTTGTA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302406 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200377 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L03,barcode: CTTGTA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157074 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302407,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200392 | GSM1157074 | GSE47774,GSE47792 | 0.015342 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L03_CTTGTA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302407 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200392 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L04,barcode: CTTGTA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157075 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302408,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200417 | GSM1157075 | GSE47774,GSE47792 | 0.004721 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L04_CTTGTA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302408 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200417 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L04,barcode: CTTGTA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157076 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302409,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200379 | GSM1157076 | GSE47774,GSE47792 | 0.007285 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L04_CTTGTA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302409 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200379 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L05,barcode: CTTGTA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157077 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302410,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200393 | GSM1157077 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L05_CTTGTA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302410 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200393 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L05,barcode: CTTGTA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157078 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302411,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200416 | GSM1157078 | GSE47774,GSE47792 | 0.007788 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L05_CTTGTA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302411 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200416 |
|
1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L06,barcode: CTTGTA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157079 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302412,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200384 | GSM1157079 | GSE47774,GSE47792 | 0 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L06_CTTGTA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302412 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200384 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L06,barcode: CTTGTA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157080 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302413,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200397 | GSM1157080 | GSE47774,GSE47792 | 0.014066 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L06_CTTGTA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302413 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200397 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L07,barcode: CTTGTA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157081 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302414,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200418 | GSM1157081 | GSE47774,GSE47792 | 0.012427 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L07_CTTGTA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302414 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200418 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L07,barcode: CTTGTA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157082 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302415,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200385 | GSM1157082 | GSE47774,GSE47792 | 0.014783 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L07_CTTGTA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302415 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200385 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L08,barcode: CTTGTA,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157083 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302416,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200402 | GSM1157083 | GSE47774,GSE47792 | 0.008488 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L08_CTTGTA_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302416 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200402 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 3,lane: L08,barcode: CTTGTA,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157084 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302417,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200419 | GSM1157084 | GSE47774,GSE47792 | 0.01206 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_3_L08_CTTGTA_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302417 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200419 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L01,barcode: CCGTCC,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157085 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302418,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200386 | GSM1157085 | GSE47774,GSE47792 | 0.017451 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_4_L01_CCGTCC_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302418 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200386 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L01,barcode: CCGTCC,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157086 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302419,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200403 | GSM1157086 | GSE47774,GSE47792 | 0.020604 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_4_L01_CCGTCC_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302419 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200403 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L02,barcode: CCGTCC,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157087 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302420,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200420 | GSM1157087 | GSE47774,GSE47792 | 0.013106 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_4_L02_CCGTCC_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302420 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200420 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L02,barcode: CCGTCC,flowcell: BC0AYPACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157088 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302421,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200395 | GSM1157088 | GSE47774,GSE47792 | 0.013609 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_4_L02_CCGTCC_BC0AYPACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302421 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200395 |
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1 | seqc sample: D,platform: Illumina HiSeq 2000,site: BGI,library id: 4,lane: L03,barcode: CCGTCC,flowcell: AC0AYTACXX | 2005 Songhu Road | Shanghai | China | Fudan University | Leming,,Shi | Illumina Casava1.8 software used for Illumina basecalling. SOLiD 5500 and 454 reads were generated with SOLiD and Roche squencers respectively.,Reads were aligned with Magic, Tophat2, SubRead, Cstar, Novoalign and NovoalignCS,Genome_build: hg19,Supplementary_files_format_and_content: tab-delimited text files include raw counts for the samples from one sequencing site | Illumina, SOLiD, and 454 libraries were prepared using standard Illumina, SOLiD, and 454 RNA-Seq protocols respectively. | GSM1157089 | Illumina HiSeq 2000 | May 15 2019 | cDNA | transcriptomic | RNA-Seq | total RNA | Homo sapiens | GPL11154 | SRA: https://www.ncbi.nlm.nih.gov/sra?term=SRX302422,BioSample: https://www.ncbi.nlm.nih.gov/biosample/SAMN02200405 | GSM1157089 | GSE47774,GSE47792 | 0.013106 | Mix of Sample A (UHRR) and Sample B (HBRR) (1:3) | Public on Aug 08 2014 | Jun 10 2013 | 9606 | SEQC_ILM_BGI_D_4_L03_CCGTCC_AC0AYTACXX | SRA | https://www.ncbi.nlm.nih.gov/sra?term=SRX302422 | https://www.ncbi.nlm.nih.gov/biosample/SAMN02200405 |