Full_PDB_Contacts / README.md
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metadata
dataset_info:
  features:
    - name: id
      dtype: string
    - name: seqs
      sequence: string
    - name: contacts
      sequence:
        sequence: uint16
  splits:
    - name: train
      num_bytes: 3896443787
      num_examples: 90193
  download_size: 1539844300
  dataset_size: 3896443787
configs:
  - config_name: default
    data_files:
      - split: train
        path: data/train-*

All PDB proteins as of 5/24/24. Contacts recorded in "COO" format, where a contact gets a tuple (i,j) if the ith and jith amino are within 8 angstrom. In huggingface datasets format are a nonredundant selection of 90 thousand. The entire 200+ thousand are uplaoded as pickle files.