README.md

metadata

tags:
  - biology
  - genbio
  - model_hub_mixin
  - protein
  - pytorch_model_hub_mixin

AIDO.StructureDecoder

AIDO.StructureDecoder is the decoder-only component of AIDO.StructureTokenizer.

How to Use

Please see experiments/AIDO.StructureTokenizer in Model Generator

Citation

Please cite AIDO.StructureTokenizer using the following BibTex code:

@inproceedings{zhang_balancing_2024,
    title = {Balancing Locality and Reconstruction in Protein Structure Tokenizer},
    url = {https://www.biorxiv.org/content/10.1101/2024.12.02.626366v2},
    doi = {10.1101/2024.12.02.626366},
    publisher = {bioRxiv},
    author = {Zhang, Jiayou and Meynard-Piganeau, Barthelemy and Gong, James and Cheng, Xingyi and Luo, Yingtao and Ly, Hugo and Song, Le and Xing, Eric},
    year = {2024},
    booktitle={NeurIPS 2024 Workshop on AI for New Drug Modalities},
}