fatmacankara commited on
Commit
9616fbd
·
1 Parent(s): d1d665f

Update code/add_alignment.py

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Files changed (1) hide show
  1. code/add_alignment.py +2 -1
code/add_alignment.py CHANGED
@@ -25,6 +25,7 @@ def do_alignment(identifier, uniprotSequence, pdbSequence, alignment_path):
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  alignments = aligner.align(uniprotSequence, pdbSequence)
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  print('Alignments')
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  print(alignments)
 
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  alignments = (list(alignments))
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  alignment_list = []
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  for alignment in alignments:
@@ -36,7 +37,7 @@ def do_alignment(identifier, uniprotSequence, pdbSequence, alignment_path):
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  alignment_list.append(alignment)
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  print(alignment_list)
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  return alignment_list
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-
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  def mutation_position_on_pdb(alignment_list, pos):
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  which_alignment_to_go = 0
 
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  alignments = aligner.align(uniprotSequence, pdbSequence)
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  print('Alignments')
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  print(alignments)
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+ """
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  alignments = (list(alignments))
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  alignment_list = []
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  for alignment in alignments:
 
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  alignment_list.append(alignment)
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  print(alignment_list)
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  return alignment_list
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+ """
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  def mutation_position_on_pdb(alignment_list, pos):
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  which_alignment_to_go = 0