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Update app.py
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app.py
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@@ -898,6 +898,50 @@ def main():
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- **Artificial Superintelligence (ASI)**
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- Not yet achieved
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"""
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st.sidebar.markdown(markdownPapers)
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- **Artificial Superintelligence (ASI)**
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- Not yet achieved
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# 🧬 Innovative Architecture of AlphaFold2: A Hybrid System
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## 1. 🔢 Input Sequence
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- The process starts with an **input sequence** (protein sequence).
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## 2. 🗄️ Database Searches
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- **Genetic database search** 🔍
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- Searches genetic databases to retrieve related sequences.
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- **Structure database search** 🔍
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- Searches structural databases for template structures.
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- **Pairing** 🤝
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- Aligns sequences and structures for further analysis.
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## 3. 🧩 MSA (Multiple Sequence Alignment)
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- **MSA representation** 📊 (r,c)
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- Representation of multiple aligned sequences used as input.
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## 4. 📑 Templates
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- Template structures are paired to assist the model.
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## 5. 🔄 Evoformer (48 blocks)
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- A **deep learning module** that refines representations:
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- **MSA representation** 🧱
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- **Pair representation** 🧱 (r,c)
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## 6. 🧱 Structure Module (8 blocks)
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- Converts the representations into:
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- **Single representation** (r,c)
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- **Pair representation** (r,c)
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## 7. 🧬 3D Structure Prediction
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- The structure module predicts the **3D protein structure**.
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- **Confidence levels**:
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- 🔵 *High confidence*
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- 🟠 *Low confidence*
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## 8. ♻️ Recycling (Three Times)
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- The model **recycles** its output up to three times to refine the prediction.
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## 9. 📚 Reference
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**Jumper, J., et al. (2021).** Highly Accurate Protein Structure Prediction with AlphaFold. *Nature.*
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🔗 [Nature Publication Link](https://www.nature.com/articles/s41586-021-03819-2)
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"""
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st.sidebar.markdown(markdownPapers)
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