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ctheodoris
/
Geneformer
like
210
Fill-Mask
Transformers
Safetensors
ctheodoris/Genecorpus-30M
bert
single-cell
genomics
Inference Endpoints
License:
apache-2.0
Model card
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470
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933ca80
Geneformer
/
geneformer
15 contributors
History:
100 commits
ctheodoris
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
933ca80
5 months ago
gene_dictionaries_30m
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
mtl
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
__init__.py
1.22 kB
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
classifier.py
64.2 kB
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
classifier_utils.py
22.3 kB
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
collator_for_classification.py
30 kB
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
emb_extractor.py
31.7 kB
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
ensembl_mapping_dict_gc95M.pkl
pickle
Pickle imports
No problematic imports detected
What is a pickle import?
3.96 MB
LFS
Add function for summing of Ensembl IDs (#377)
5 months ago
evaluation_utils.py
9.75 kB
move dicts to init
6 months ago
gene_median_dictionary_gc95M.pkl
pickle
Detected Pickle imports (2)
"numpy.core.multiarray.scalar"
,
"numpy.dtype"
How to fix it?
1.51 MB
LFS
Add function for summing of Ensembl IDs (#377)
5 months ago
gene_name_id_dict_gc95M.pkl
pickle
Pickle imports
No problematic imports detected
What is a pickle import?
2.04 MB
LFS
rename for consistency
5 months ago
in_silico_perturber.py
64.9 kB
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
in_silico_perturber_stats.py
44.8 kB
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
mtl_classifier.py
13.4 kB
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
perturber_utils.py
32.9 kB
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
pretrainer.py
36.6 kB
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
token_dictionary_gc95M.pkl
pickle
Pickle imports
No problematic imports detected
What is a pickle import?
426 kB
LFS
update with 12L and 20L i4096 gc95M models, multitask and quantiz code
5 months ago
tokenizer.py
25.4 kB
Add function for summing of Ensembl IDs (#377)
5 months ago
